Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1085 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  109 bits (273), Expect = 7e-28
 Identities = 105/426 (24%), Positives = 187/426 (43%), Gaps = 28/426 (6%)

Query: 420  DRRTGLPNRVVLRERLANFAA--NEH-----LIALKVTHFNQINEKYGYPVGDKLLRDLS 472
            D  T LPNR +L +RL+   A    H     L+ L + HF  IN+  G+PVGD +L+ ++
Sbjct: 657  DPLTNLPNRALLMDRLSQQIALLKRHNLRGALMFLDLDHFKHINDSLGHPVGDTVLKIIT 716

Query: 473  EQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGK--SIHSHFYQFVEQLEHVNFEPYG 530
             +    L+  +  +  +  +G G+   V  + L+G    + +   +  + L  +  EP  
Sbjct: 717  AR----LEASVRMEDTVARLG-GDEFVVLLSGLEGSRSDVSAQVRELADTLRELLSEPMF 771

Query: 531  LPNVDYLSISLCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVR 590
            L     L ++   G+    D    +P +LL RA  A   A ++  +        +Q++  
Sbjct: 772  LDG-QRLQVTPSIGIALIPDHGS-TPTDLLKRADIALYRAKDSGRNTTQMYHNTMQKAA- 828

Query: 591  QERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIED-EGEIILPGNFLPII 649
             ERL   + +  A+ R +  V  QP   AR++ +   E LVR    +     P  F+ ++
Sbjct: 829  SERLRMETDLRLALSRGEFSVQYQPQVDARNNRITGAEALVRWHHPQLGAQSPTEFIKVL 888

Query: 650  TDTHLYTRLSRQMITHTFNMMRH-------RPEAFS--INLSPQDLMSERTLQHLEAAIK 700
             D+ L   +   ++       +H        P  FS  +N+SP+       ++ +E ++ 
Sbjct: 889  EDSGLILEVGTWILDEACAAFKHLIAKGLINPLDFSLCVNISPRQFRQNDFVERIEHSLG 948

Query: 701  SVADPARV-GLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQ 759
            S   P  +  LE+ E   I++    I      + LG +  +DDFG+GYS++  + +L   
Sbjct: 949  SHGLPCSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVD 1008

Query: 760  VIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQG 819
             +K+D S IR+   D     I   +V + + L  + +AE V         + +G    QG
Sbjct: 1009 TLKIDQSFIRDATTDPNDAEIIRAIVAMARSLELEVIAEGVETLEQLAFLQGLGCHLYQG 1068

Query: 820  YFLGRP 825
            Y   RP
Sbjct: 1069 YLHSRP 1074