Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  116 bits (291), Expect = 4e-30
 Identities = 113/428 (26%), Positives = 187/428 (43%), Gaps = 41/428 (9%)

Query: 420 DRRTGLPNRVVLRERLANFAANEH-------LIALKVTHFNQINEKYGYPVGDKLLRDLS 472
           D  TGLPNR++L +R+    A          L+ + + +F  IN+  G+  GD+LL+ ++
Sbjct: 352 DLLTGLPNRILLNDRIEQGLARAARLGYYLTLVFIDLDNFKFINDGLGHVAGDELLKSIA 411

Query: 473 EQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFE---PY 529
            +    L   L G   +  +G  E+  V        S H      +  LE V  E   P 
Sbjct: 412 AR----LAGSLRGSDTVARVGGDEFVLVL-------SDHYRISTVISLLERVLNEIRRPV 460

Query: 530 GLPNVDYLSISLCAGLVSQGDFAEHSPDELLLRAIEARRYAFN----NNHHFCNAARLKV 585
            L   ++   +     +  GD  +    + LL+  +   YA      NN  F      ++
Sbjct: 461 TLAGREFQVGASIGVAMFPGDGEDA---QTLLKHADIAMYAAKKRGRNNFQFFTHDLNRI 517

Query: 586 QESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIED-EGEIILPGN 644
            +    ERLN  + +  A+ RD+  V+ QP   A   IV   E L R  D +  +I P  
Sbjct: 518 AD----ERLNLEAAMRAALERDEFSVHYQPKVDASRRIVG-VEALARWTDAQLGVIGPDR 572

Query: 645 FLPIITDTHLYTRLSRQMITHTF------NMMRHRPEAFSINLSPQDLMSERTLQHLEAA 698
           F+P+  ++ L   L+  ++   F      N  R  P   ++NLSP   + +  +  +   
Sbjct: 573 FIPVAEESGLIMPLTLAVLRRAFSDARQWNAGRAIPLMVAVNLSPLLFLGDDVVDRVCTV 632

Query: 699 IKSVA-DPARVGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLE 757
           +  V   P +V LE+ E+  + D  R + +   F+  G  + +DDFG+GYS +  + +  
Sbjct: 633 LDDVGLPPNQVELEITETVFLGDGTRAVAILAEFKARGFRLAMDDFGTGYSALSYLRRFP 692

Query: 758 PQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYL 817
             +IK+D SL+  ++Q+ +   IA   + L + L+   VAE V N          G D  
Sbjct: 693 LDIIKIDRSLVTGLEQEEEVAMIARAAISLGKSLHKTVVAEGVENAAQFDFLCRNGCDEF 752

Query: 818 QGYFLGRP 825
           QGY L RP
Sbjct: 753 QGYLLSRP 760