Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., diguanylate cyclase/phosphodiesterase from Pseudomonas syringae pv. syringae B728a

 Score =  109 bits (272), Expect = 6e-28
 Identities = 108/457 (23%), Positives = 206/457 (45%), Gaps = 37/457 (8%)

Query: 387 LIRHAFHDLDAMTD-NLAQQIRAQTSLLTASYRRDRRTGLPNR----VVLRERLANFAAN 441
           ++ + + D  ++ +  +  +  +  +LL A+  +D  TGLPNR      L   +    A 
Sbjct: 192 ILHYQYRDFTSLVNVQVKTEQLSNENLLLAN--QDSLTGLPNRRQFFQTLDTAMTEAMAQ 249

Query: 442 EHLIALKVTH---FNQINEKYGYPVGDKLLRDLSEQFQVFLDQKLAGQSGLYAIGVGEWA 498
              +A+ V     F  +N+ YG+ +GD+LL  ++E+       K+     +  +G  E+A
Sbjct: 250 RSGLAVGVLDLDGFKPVNDLYGHRIGDRLLMLVAERLTSASSDKVH----VSRLGGDEFA 305

Query: 499 TVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHSPDE 558
            V +  +D +++ + F + +  L H +FE   +P    + I    GL +    A+++   
Sbjct: 306 LVIKGDIDSEALQA-FGKHLCDLMHESFELSDMP----IQIGATLGLATYPATADNAT-- 358

Query: 559 LLLRAIEARRYAF--NNNHHFCNAARLKVQESVRQERLN----WLSRVSRAVVRDDVVVY 612
              +  E   YA     NH   N     +  +  +E+L+        + RA +  +  V 
Sbjct: 359 ---QLFEFADYALYQGKNH---NPGTTCLFSASHREQLHADGVTEQALRRANLETEFHVL 412

Query: 613 AQPICQARSHIVASYECLVRIED-EGEIILPGNFLPIITDTHLYTRLSRQMITHTFNMMR 671
            QPI ++ +    ++E L R    E   + P +F+PI     +  +L+  ++T   +M  
Sbjct: 413 FQPIIESCTRETVAFEALARWNSPELGAVSPAHFIPIAERIGMINKLTVPLLTQALSMAL 472

Query: 672 H--RPEAFSINLSPQDLMSERTLQHLEAAIK-SVADPARVGLEVLESEQIKDYGRMIEVC 728
               P   S NLS  D  +  ++  +   I+ S  D +R+ LE+ E+  ++D  ++ +  
Sbjct: 473 SWPAPVRLSFNLSAHDCATWESVNRIVEIIEHSGFDASRLDLEITETAVMQDIAQVQQAI 532

Query: 729 NHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLC 788
             FR LG  I +DDFG+G+S++ ++  L    +K+D S +  +  +    +I + LV L 
Sbjct: 533 TQFRKLGCGISLDDFGTGFSSLSQLHALALTKLKIDRSFVTGVHNNPASYKIVKSLVALS 592

Query: 789 QVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRP 825
             ++   V E V  Q        +G   +QGYF   P
Sbjct: 593 LDMSLGCVIEGVETQDELNALTTLGCTMVQGYFYSPP 629