Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Synechococcus elongatus PCC 7942

 Score =  116 bits (290), Expect = 8e-30
 Identities = 117/461 (25%), Positives = 200/461 (43%), Gaps = 54/461 (11%)

Query: 395  LDAMTDNLAQQIRAQTSLLTASYRRDRRTGLPNRVVLRERLA-NFAANEHL-------IA 446
            L   + ++ Q+I  Q  L   +   D  TGL NR +L ERL  +   ++ L       + 
Sbjct: 598  LQTTSRDVTQRIEIQNQLQYDACH-DSLTGLANRNLLIERLELSLKRSKRLQNYKYAVLF 656

Query: 447  LKVTHFNQINEKYGYPVGDKLLRDLSEQFQ-VFLDQKLAGQSGLYAIGVGEWATVFRAKL 505
            L +  F  IN+  G+  GD+LL  ++++ Q +     LA + G            F   +
Sbjct: 657  LDLDRFKVINDSLGHITGDQLLVSIAQKLQSIIRSHDLAARLG---------GDEFVVLV 707

Query: 506  DGKSIHSHFYQFVEQLEHVNFEPYGLPNVD-YLSISLCAGLVSQGDFAEHSPDELLLRAI 564
            +         +  E++      P  L     Y S S+  G+V  G     S  +LL  A 
Sbjct: 708  EDIQTFDEPIKVAERILAAIQVPLELEERSIYTSTSI--GIVF-GSHEYESATQLLRDAD 764

Query: 565  ----------EARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQ 614
                       AR   F++  H    ARL ++  +RQ           A+ R + V+Y Q
Sbjct: 765  TAMYRAKSRGRARYEVFDSAMHSQALARLHLENDLRQ-----------AIARQEFVLYYQ 813

Query: 615  PICQARSHIVASYECLVRIEDEGE-IILPGNFLPIITDTHLYTRLS--------RQMITH 665
            PI Q ++  +  +E L+R +   E I LP + +PI  +T L T +         RQ+   
Sbjct: 814  PIIQLQTGKITGFEALIRWQHPTEGIKLPIDLIPIAEETGLITSIDYWVLNQACRQLSEW 873

Query: 666  TFNMMRHRPEAFSINLSPQDLMSERTLQHLEAAIKSVA-DPARVGLEVLESEQIKDYGRM 724
              +  +    + S+NLS Q+L  +  +  +++ +++    P  + LE+ ES  I++  + 
Sbjct: 874  QASYSQAADLSMSVNLSAQNLQHDHLMDEIQSVLQATKIKPGSLTLEITESMLIENTDQT 933

Query: 725  IEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQL 784
            I++       G  I +DDFG+GYS++  + KL    +K+DGS +R I  +    +I   +
Sbjct: 934  IQLLAAINEQGIEISIDDFGTGYSSLSYLHKLPVNNLKVDGSFVRKITTESTNYQIVNTI 993

Query: 785  VKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRP 825
            + L   L  K +AE +       +   +G  Y QGY   RP
Sbjct: 994  IALNNQLGLKAIAEGIETHEQLDLLSQLGYQYGQGYLFARP 1034