Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (287), Expect = 2e-29
 Identities = 115/459 (25%), Positives = 199/459 (43%), Gaps = 47/459 (10%)

Query: 391  AFHDLDAMTDNLAQQIRAQTSLLTASYRRDRRTGLPNRVVLRERLANFAANEH------- 443
            A H +   TD   ++   +   L ASY  D  T LPNR + ++RL +  A  H       
Sbjct: 1042 ASHFVAVFTDITDRKKAEEDLRLLASY--DPLTNLPNRTLFQDRLDHALAQAHRTGNMVA 1099

Query: 444  LIALKVTHFNQINEKYGYPVGDKLLRDLSEQFQVFLDQ-----KLAGQSG---LYAIGVG 495
            L+ L +  F  IN+  G+ +GD LL+ ++ + Q  + +     +L G      L  +   
Sbjct: 1100 LLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQNCVREGDTVARLGGDEFTIILEGVAKT 1159

Query: 496  EWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHS 555
            + ATV   KL    I +    F+ + + +N  P    ++  +  S    LV   D A + 
Sbjct: 1160 KAATVIAEKL----IRAFQTPFILEDQALNISPSIGISLYPMDASDSTSLVKYADTAMYH 1215

Query: 556  PDELLLRAIEARRYAFNNNHHFCNAARLKVQE-SVRQERLNWLSRVSRAVVRDDVVVYAQ 614
               L             NN  F     L++ E ++R  +L   + + +A+VR ++ +  Q
Sbjct: 1216 AKSL-----------GRNNFQFYT---LRLNEYAMRHVQLE--AGIKQAIVRQELSLVFQ 1259

Query: 615  PICQARSHIVASYECLVRIED-EGEIILPGNFLPIITDTHLYTRLSRQMITHTFNMMRHR 673
            P  +     +  +E L+R    E   I P  F+P+  +  +  +L   ++      M   
Sbjct: 1260 PKFRVSDGSITGFEALLRWNSKELGPISPAEFIPLAEEIGIINQLGHWVVNEACRHMAQF 1319

Query: 674  PEA------FSINLSPQDLMSERTLQHLEAAIKSVADPAR-VGLEVLESEQIKDYGRMIE 726
              A       ++NLS + L ++  L  +E A+     PA+ + LE+ ES  +K     + 
Sbjct: 1320 AAAGFDDLHVAVNLSARQLKAD-ILSTIEVALAVAGLPAKCLELELTESMIMKSPQESVA 1378

Query: 727  VCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVK 786
            V    + LG ++ VDDFG+GYS++  + +     +K+D   +R+I  D     I   ++ 
Sbjct: 1379 VLQRLKALGVSLAVDDFGTGYSSLAYLKRFPLDTLKIDREFVRDISTDPDDAAITGAIIA 1438

Query: 787  LCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRP 825
            L   L    VAE V N+         G D +QG+ LG+P
Sbjct: 1439 LAHSLELNVVAEGVENEAQLEHLRKHGCDQVQGFLLGKP 1477