Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  121 bits (303), Expect = 2e-31
 Identities = 108/436 (24%), Positives = 193/436 (44%), Gaps = 34/436 (7%)

Query: 411 SLLTASYRRDRRTGLPNRVVLRERLANFAANEHLIAL---KVTHFNQINEKYGYPVGDKL 467
           S L      D  TGLPNR     R+   A+ +  +AL    +  F  IN+  G+  GD++
Sbjct: 406 SELRRQAEEDAVTGLPNRTTFEARMKRLASGQETVALCYLDLEQFKIINDSCGHLEGDRM 465

Query: 468 LRDLSEQFQVFLDQ-KLAGQSGLYAIGVGEWATVFRAKLDGKSIHSH---FYQFVEQLEH 523
           L  +++ FQ  L   +L G+ G    G+          L G+S H          ++L  
Sbjct: 466 LCMVAKTFQSCLAPGELLGRVGGDEFGI---------LLLGRSAHEVALLLKTLQQKLSM 516

Query: 524 VNFEPYGLPNVDYLSISLC---AGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNA 580
              E  G  +   +SI +    A L   G+  + +     +  + A++   N  H + + 
Sbjct: 517 QVLESQGQCHRVGVSIGVAFARAPLPPVGELFKDAD----IACVAAKQKGSNQIHFYDDK 572

Query: 581 ARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVAS-YECLVRI-EDEGE 638
            +   + + ++    W  R+++A+   ++ +Y QPI            E L+RI E  G 
Sbjct: 573 DK---ELNYQRNAPKWALRIAKAIHNRELELYFQPIHSLHGGSPRKRMEILLRIRESNGR 629

Query: 639 IILPGNFLPIITDTHLYTRLSRQMITHTFNMMRHRPE-----AFSINLSPQDLMSERTLQ 693
           I+ P  F+       L   + + +++     +   P        SINLS   L  E    
Sbjct: 630 ILPPAQFIASAERFKLMPEVDKAVVSMAMEWLAAHPNFWHDHCLSINLSGNSLGVEGMES 689

Query: 694 HL-EAAIKSVADPARVGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDE 752
            + E   ++   PA +  E+ E+  I++  R +++    R  G    +DDFGSG+++   
Sbjct: 690 FIVEQLQRNGIPPACICFEITETTAIQNRQRALDMLRSLRKQGFAFAIDDFGSGFASYGY 749

Query: 753 IVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDM 812
           + +L    +K+DG  +R +  + K   I + +  +C V+  +TVAEFV +Q +    E++
Sbjct: 750 LRELPVDYVKIDGCFVRQLASNAKDYAIVKSIHDVCSVMGIETVAEFVESQDIMARLEEI 809

Query: 813 GVDYLQGYFLGRPSRL 828
           G++Y QGY +GRP  L
Sbjct: 810 GINYAQGYAVGRPKPL 825