Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  117 bits (293), Expect = 3e-30
 Identities = 101/425 (23%), Positives = 186/425 (43%), Gaps = 33/425 (7%)

Query: 420 DRRTGLPNRVVLRERLANFAA----NEHLIA---LKVTHFNQINEKYGYPVGDKLLRDLS 472
           D  T LPNR++L +R+    A     + L+A   L +  F  IN+ +G+ VGD LL +++
Sbjct: 479 DSLTNLPNRLLLADRMGQALALAVRRQDLLAVCYLDLDSFKPINDTWGHSVGDALLIEVA 538

Query: 473 EQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLP 532
            + Q    Q    +  +  +G  E+  +    L G    +   + V ++      PY + 
Sbjct: 539 RRLQ----QNARAEDTVARLGGDEFVVL----LCGFKAEAEVERVVRRMMDSIATPYSVG 590

Query: 533 NVDYLSISLCAGLVSQGDFAEHSPDELLLRA----IEARRYAFNNNHHFCNAARLKVQES 588
               +++++  G+ +    AE   D L+  A     EA+R   N  H+F        ++ 
Sbjct: 591 GRQ-VTLTVSMGITTFPRDAEQEADALIRHADQAMYEAKRQGRNRIHYFDAE-----KDR 644

Query: 589 VRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIED-EGEIILPGNFLP 647
           + +ER  + +R+  A+  ++  ++ QP     S + +  E L+R    E  ++LPG FLP
Sbjct: 645 LHKERQTYYNRMVAALEANEFQLHYQPTIDLVSGVFSGVEALIRWRHPERGLLLPGAFLP 704

Query: 648 IITDTHLYTRLSRQMITHTFNMMRHRPE-----AFSINLSPQDLMSERTLQHLEAAIKS- 701
            I DT L   L   ++           +        +NL    L  +  +    A +   
Sbjct: 705 DIEDTDLTVPLGEWILREALRQKERWQDMGLSLTVGVNLFGYHLQQDSFVARFAAILAEF 764

Query: 702 -VADPARVGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQV 760
               P  V LE++E+  ++D   + E     +  G    +DDFG+GYS++    +L    
Sbjct: 765 PAVHPEEVTLEIVETTAMRDLAAISEKMWDCKRFGVDFALDDFGTGYSSLTYFRRLPVTH 824

Query: 761 IKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGY 820
           +K+D S + +I ++ + + + + +V +   L  K VAE       C      G D+ QG+
Sbjct: 825 LKIDRSFVTDILENAQDQAMVQSIVAMSHALGRKVVAEGAETLAHCAALGRYGCDFAQGF 884

Query: 821 FLGRP 825
            + RP
Sbjct: 885 GIARP 889