Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  145 bits (366), Expect = 1e-38
 Identities = 115/438 (26%), Positives = 210/438 (47%), Gaps = 31/438 (7%)

Query: 409 QTSLLTASYRR----DRRTGLPNRVVLRERLANFAANEHLIAL---KVTHFNQINEKYGY 461
           Q  LL    RR    D  TGL NR    ERL  FA +   +A+    +  F  IN+  G+
Sbjct: 417 QEELLKHQLRRRANFDNVTGLLNRCAFEERLQAFAEDAQTLAICYFDLEQFKLINDSCGH 476

Query: 462 PVGDKLLRDLSEQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQL 521
             GD +L+ +++  Q  L+    GQ  L  +G  E+    +  L    +     Q +  +
Sbjct: 477 NAGDAMLKMVAKAIQASLE----GQGLLARLGGDEFGLALK-DLGVVPLAQQVKQIINAV 531

Query: 522 EHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHSPDELL----LRAIEARRYAFNNNHHF 577
                E +G     +  + + AG V+       +  ELL    +  I A+R   N  H +
Sbjct: 532 GKQVMEHHGC----HYHVGISAG-VALARAPYINALELLKDADIACIAAKRKGSNQVHFY 586

Query: 578 CNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDE- 636
            +  +   + + ++    W  R+++A+  +++++Y QPI           E L+RI++  
Sbjct: 587 DDKDK---ELTYQRNAPKWAVRIAQAIEHNELLLYYQPIKALGPQGKQRMEVLLRIQEPC 643

Query: 637 GEIILPGNFLPIITDTHLYTRLSRQMITHTFNMMRHRPEAF-----SINLSPQDLMSERT 691
           G I+ P  F+       L T + +++I  TF  +    E +     SINLS   L +E  
Sbjct: 644 GRILAPAQFIAAAERFKLMTDVDKEVIRKTFLWLSLHEELWADHCLSINLSANSLGAEGM 703

Query: 692 LQHLEAAIKSVADPAR-VGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNI 750
           + ++ A ++  A P++ +  E+ E+  I++  R +E+ N  +  G +  +DDFG+G+++ 
Sbjct: 704 VDYIIAQLERFAIPSQCICFEITETSAIQNRNRAMEMLNQLKKQGFSFALDDFGTGFASY 763

Query: 751 DEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISE 810
             + +L    +K+DG  I+++  + K   I + +  +C+V+  +TVAEFV NQ +    +
Sbjct: 764 GYLRELPVNYVKIDGCFIKSLASNAKDYAIVKSIHDVCRVMGIETVAEFVENQEIIERLK 823

Query: 811 DMGVDYLQGYFLGRPSRL 828
            +G++Y QGY +GRP  L
Sbjct: 824 SIGINYAQGYAIGRPKSL 841