Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (287), Expect = 1e-29
 Identities = 95/422 (22%), Positives = 193/422 (45%), Gaps = 29/422 (6%)

Query: 420 DRRTGLPNRVVLRERLANFAA-------NEHLIALKVTHFNQINEKYGYPVGDKLLRDLS 472
           D+ T LPNR++L +R+ +  A       +  L+ + + HF  +N+  G+  GD++++ ++
Sbjct: 396 DQLTDLPNRILLHDRINHACAVADSYDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQVA 455

Query: 473 EQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLP 532
           ++ Q  +D        L  IG  E+  +  +      + S     V  L      P+ + 
Sbjct: 456 KRLQSLIDPNAT----LGRIGGDEFVLLLPSLTATSQVDSIATDIVRSLN----TPFRID 507

Query: 533 NVDYLSISLCAGLVSQGDFAEHSPDELLLRAIEARRYAFNN--NHHFCNAARLKVQESVR 590
             +Y ++S+  G+      A  +  E L+  ++A  Y   +   + FC  +    QE  +
Sbjct: 508 GQEY-TLSVSVGISIYPSDALRA--EELMTHVDAAMYRAKDLGRNRFCYFSEDLEQELTK 564

Query: 591 QERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIED-EGEIILPGNFLPII 649
           +  L  L R   A+  + + VY QP    ++  +   E L R+ D  G++I P +F+P+ 
Sbjct: 565 RHELVTLLRT--AIDTEAIEVYYQPKVDLKTKEIIGAEALARLYDPSGKLISPLDFIPLA 622

Query: 650 TDTHLYTRLSRQMITHTFN-----MMRHRPEAFSINLSPQDLMSERTLQHLEAAIKSVA- 703
            +T L  +L   ++  +         R RP   ++N++ +   +      +   ++    
Sbjct: 623 EETGLIHQLGEIILKQSCMAAKAWQKRGRPLQIAVNIAAKQFTNPEFCDSVAKVLELTGL 682

Query: 704 DPARVGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKL 763
           D + + LEV ES  + D+   + V N   +LG +I +DDFG+GYS++  +       +K+
Sbjct: 683 DSSFLELEVTESSLMYDFDEALNVLNTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLKI 742

Query: 764 DGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLG 823
           D S ++++  D +   I + ++ L + L  K +AE + +    +    +  +  QGY   
Sbjct: 743 DQSFVKDMLGDEQSLDIVKAVIHLAKSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMFS 802

Query: 824 RP 825
           +P
Sbjct: 803 KP 804