Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 936 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  126 bits (316), Expect = 7e-33
 Identities = 109/439 (24%), Positives = 198/439 (45%), Gaps = 35/439 (7%)

Query: 406 IRAQTSLLTASYRRDRRTGLPNRVVLRERLANFAANEHL-------IALKVTHFNQINEK 458
           I+ + + +T     D  TGLPNR  + E L +  A   +       + + +  F  IN+ 
Sbjct: 491 IKQKEAQITHQANHDDLTGLPNRKHIFELLHDAIARASVRGQKLAVVFIDMDGFKFINDS 550

Query: 459 YGYPVGDKLLRDLSEQFQVFLDQ-KLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQF 517
           Y +  GD+LL D++ + +  L    + G+ G            F A + G S   H    
Sbjct: 551 YDHATGDQLLCDVARRLRAALRPGDMLGRLG---------GDEFVAAVGGISDKGHLDGI 601

Query: 518 VEQLEHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHSPDELLLRA----IEARRYAFNN 573
           + +L     EP+    + + S++   G+    D  + S + LL RA      A+    N 
Sbjct: 602 MRRLFETFAEPFEYGGMGF-SVTASFGVSVYPDDGD-SANALLSRADIAMYRAKDMGKNA 659

Query: 574 NHHFCNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRI 633
              FC    L+     R ++      +  A+   +  +  QPI  AR+  V   E L+R 
Sbjct: 660 IAVFCEEQCLEFTRRYRMDQ-----EIKAAIAGREFRLVYQPIADARTLRVRKVEALLRW 714

Query: 634 EDEGEIILPGN-FLPIITDTHLYTRLSRQMIT-----HTFNMMRHRPEAFSINLSPQDLM 687
           E +G ++ P + F+P+   ++    ++R ++      H    +       ++N+S + L 
Sbjct: 715 ERDGAVVAPPSVFIPVAESSNAIREITRLVVEMACVQHAAWRLEGLTLPVAVNISSRCLN 774

Query: 688 SERTLQHLEAAIKSV-ADPARVGLEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSG 746
           S+ T+ H+ A + +    P  + +E+ E+  +++Y R   +    R LG  + +DDFG+G
Sbjct: 775 SDETISHIAACLNAYDVPPDALEVEITETSLMQNYERGNAMLCTLRDLGVRVSLDDFGTG 834

Query: 747 YSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVC 806
           YS++  + ++    +K+D + ++ + ++     I E ++ L + L   TVAE V      
Sbjct: 835 YSSLQYLARMPIHALKIDRTFVQELLEEGGSLEIVETILGLARSLRLATVAEGVETAAQL 894

Query: 807 RISEDMGVDYLQGYFLGRP 825
                MGVDYLQGY LGRP
Sbjct: 895 SALRGMGVDYLQGYCLGRP 913