Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (308), Expect = 4e-32
 Identities = 110/438 (25%), Positives = 189/438 (43%), Gaps = 39/438 (8%)

Query: 412 LLTASYRRDRRTGLPNRVVLRERLANFAANEHL------IALKVTHFNQINEKYGYPVGD 465
           L+      D  TGL NR  L  ++      + L      + + + +F Q+N+ YG+  GD
Sbjct: 310 LIKYQANNDSLTGLANRNALFRQIQELINADSLTPGFSFMLMDLDNFKQVNDTYGHDKGD 369

Query: 466 KLLRDLSEQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEHVN 525
            LL  + EQ ++ LD     Q+    +G  E+A +    L G        Q  +++    
Sbjct: 370 VLLVQMVEQVKICLDP----QAVFARLGGDEFAIL----LPGVVTQRELSQLADKINKQV 421

Query: 526 FEPYGLPNVDYLSISLCAGLVSQGDFAEHSPD-ELLLRAIEARRYAFN----NNHHFCNA 580
           +  Y L +   +  S+  G+     F E + D E LL   +   Y       N +HF   
Sbjct: 422 YRRYELSHDKGVYSSVSIGIAR---FPEDALDLEQLLNCADQAMYISKANGRNRYHFFTE 478

Query: 581 ARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDEGEII 640
              +  E +     N  + + +A+ ++   +Y QPI  A + ++   E L+R + EG+ I
Sbjct: 479 QMQQNAERIA----NLHTLLKQALEQNAFELYFQPIVDATTGLIVRAEVLLRWQHEGQFI 534

Query: 641 LPGNFLPIITDTHLYT---RLSRQMITHTFNMMRHR--PEAFSINLSPQDLMSERTLQHL 695
            P  F+PI  ++ L     R  RQ +  T   M+    P + +IN+S  +  S       
Sbjct: 535 SPDEFIPIAENSGLIVSIGRCVRQAVMQTIVEMQALGWPMSLAINVSTFEFWSHELQDEF 594

Query: 696 EAAIKSVADPARVG--------LEVLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGY 747
             +   + +   V         LE+ ES  +K +  +I+V N  R  G  I +DDFG+GY
Sbjct: 595 CDSFTDIIEGLGVEDFPYELITLEITESLLMKKHAHLIQVLNELRARGIKISLDDFGTGY 654

Query: 748 SNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCR 807
           S++  +       IK+D S I  + +  +   + E +V+L   LN +  AE V  Q   +
Sbjct: 655 SSLSYLANFPIDQIKIDKSFIDRLAEGERHLALIEAIVRLSHALNLRVTAEGVETQEQLQ 714

Query: 808 ISEDMGVDYLQGYFLGRP 825
           +  D  +  +QGY   +P
Sbjct: 715 VMMDNHIQEIQGYLFYKP 732