Pairwise Alignments
Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056
Subject, 740 a.a., putative cyclic di-GMP phosphodiesterase PdeA from Enterobacter sp. TBS_079
Score = 127 bits (320), Expect = 2e-33
Identities = 112/417 (26%), Positives = 182/417 (43%), Gaps = 27/417 (6%)
Query: 420 DRRTGLPNRVVLRERLANFAANEHLIALKVTHFNQINEKYGYPVGDKLLRDLSEQFQVFL 479
D TGLPN L + L + + + L++ + ++ YG + R ++ Q FL
Sbjct: 338 DPLTGLPNIRALEDFLQDHP-DAKVCCLRMDNLEFLSRHYGILMRVHCKRMVTTSLQPFL 396
Query: 480 DQKLAGQSGLYAIGVGEWATVFRAKLDGKSIHSHFYQFVEQLEH--VNFEPYGLPNVDYL 537
+ L+ + E V L G V+QL + + GL +
Sbjct: 397 QK----DERLFQLPGSELVLV----LLGPGTAERLQHMVDQLNSRKIVWNNTGLD----I 444
Query: 538 SISLCAGLVSQGDFAEHSPDELLLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWL 597
G+V G+ H+ +L A ++ +N N+ L+V ER+ L
Sbjct: 445 EFGASWGMVENGEKLHHTLGQLSWLAEQS--CGAHNVLALTNS--LEVASGQTTERVLML 500
Query: 598 SRVSRAVVRDDVVVYAQPICQARSHIVASYECLVRIEDEGEIILPGNFLPIITDTHLYTR 657
+R+ A+ +YAQPI +A YE L R+E EGEII P F+P+I +L R
Sbjct: 501 ARIKHALDAGQFHLYAQPIQKADGS--GYYEILARMESEGEIITPDRFIPLIAQFNLSHR 558
Query: 658 LSRQMITHTFNMMRHRPEA-----FSINLSPQDLMS-ERTLQHLEAAIKSVADPARVGLE 711
++ +R P FS+NL P LM E +++ + P V +E
Sbjct: 559 FDMCVMEKLLVWLRDHPATHAGVRFSVNLMPLTLMQKEVSIEICSLFERYGVAPQAVVIE 618
Query: 712 VLESEQIKDYGRMIEVCNHFRTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNI 771
+ E + + G I+ R G I +DDFG+GY+N + + +L+ +IK+DG +++I
Sbjct: 619 ITEEQAFSNSGSSIKNIQQLRDCGFRIAIDDFGTGYANYERLRRLQADIIKIDGCFVKDI 678
Query: 772 DQDVKQRRIAEQLVKLCQVLNAKTVAEFVHNQTVCRISEDMGVDYLQGYFLGRPSRL 828
D I + + L + + VAE+V GVDYLQGY +G+P L
Sbjct: 679 CTDDMDAMIVQSICNLAKTKSLSVVAEYVETSEQREKLLHFGVDYLQGYLIGKPKPL 735