Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1072 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  109 bits (272), Expect = 1e-27
 Identities = 107/449 (23%), Positives = 181/449 (40%), Gaps = 44/449 (9%)

Query: 392  FHDLDAMTDNLAQQIRAQTSLLTASYRRDRRTGLPNRVVLRERLANFAANEH-------L 444
            FHD+          ++A+ + +      D  TGLPNR +L ERLA              L
Sbjct: 613  FHDIS--------DLKAKEAQIRYQGMHDALTGLPNRALLLERLAGELKEGQGTGRLCGL 664

Query: 445  IALKVTHFNQINEKYGYPVGDKLLRDLSEQFQVFLD-----QKLAGQSGLYAIGVGEWAT 499
            + + + +F  IN+  G+  GDK + +++E   + +       +L G    Y I V     
Sbjct: 665  LYIDIDNFKTINDSLGHEAGDKFIAEVAEHLTLLIRPEDTLSRLGGDE--YVILVANPGE 722

Query: 500  VFRAKLDGKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHSPDEL 559
                 L  + I  HF Q +  L+              L + L  G+       +  PDEL
Sbjct: 723  EREVVLVAERILHHFSQPIALLDRE------------LHVGLSIGIAIHPADGK-GPDEL 769

Query: 560  LLRAIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQA 619
            L  A  A   A     +        + + +R  R+    R+  A+   ++V + QP    
Sbjct: 770  LTNADLAMYRAKAQGKNTYERFSPHLHDRIRS-RMELEGRLRHALRHGEIVPHFQPRVDL 828

Query: 620  RSHIVASYECLVRIE-DEGEIILPGNFLPIITDTHLYTRLSRQMITHTFNMMRHRPE--- 675
             +  +   E L R    +G  I PG F+P+  D  L   L   M+  +    R   +   
Sbjct: 829  ATGRIVGAEALARWTLPDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALMDEGL 888

Query: 676  ---AFSINLSPQDLMSERTLQHLEAAIKSVA-DPARVGLEVLESEQIKDYGRMIEVCNHF 731
                 ++NLS         +  + AA++     P R+ LE+ ES  + D  R +   +  
Sbjct: 889  PDITMAVNLSLVQCRHADLVGRVLAALRDTGVPPERLELEITESAIMSDVTRTLRRLDRL 948

Query: 732  RTLGATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVL 791
              LG T+ VDDFG+GYS++  +  +    +K+D S +R++      R IA  ++ + + L
Sbjct: 949  AALGITLAVDDFGTGYSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAMARNL 1008

Query: 792  NAKTVAEFVHNQTVCRISEDMGVDYLQGY 820
            +   +AE V          D G   +QG+
Sbjct: 1009 DLDVIAEGVETGAQMHFLRDHGCRVVQGF 1037