Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 793 a.a., HAMP domain/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (278), Expect = 1e-28
 Identities = 117/449 (26%), Positives = 178/449 (39%), Gaps = 29/449 (6%)

Query: 395 LDAMTDNLAQQIRAQTSLLTASYRRDRRTGLPNRVVLRERLA--------NFAANEHLIA 446
           L      +AQ I  +   L      D  TGL NR  L E LA          +    +I 
Sbjct: 328 LQTAVTRMAQAISQREQELAWFATHDDLTGLANRKALHEMLAARLDRLEEGASETVAVIF 387

Query: 447 LKVTHFNQINEKYGYPVGDKLLRDLSEQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKLD 506
           + +  F  IN+  G+  GD ++   + +   F+         L+A         F    D
Sbjct: 388 IDIDRFKAINDSMGHTWGDNVIAAFAARLGAFMHP-------LHAFCARVGGDEFVVVPD 440

Query: 507 GKSIHSHFYQFVEQLEHVNFEPYGLPNVDYLSISLCAGLVSQGDFAEHSPDELLLRAIEA 566
             + H+        L H+   PY + N   + +S  AG++  GD  E SPD ++  A  A
Sbjct: 441 ASATHNVVRDTRALLAHLG-TPYDI-NGREVRLSASAGVLFVGDPGE-SPDVIIRNANAA 497

Query: 567 RRYAFNNNHHFCNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQARSHIVAS 626
              +        +  R    +S    RL+    +  A     + +  QPI  A    + S
Sbjct: 498 MHRSKERGFGRISIFRPLHLDSYML-RLDIERELPLAAATGQLHMVYQPIVNASDGSLHS 556

Query: 627 YECLVRIEDEGEIIL-PGNFLPIITDTHLYTRLSRQMITHTFNMMRHRPEA--------F 677
           +E L+R        L P  F+ +   T     L    +      +R   EA        F
Sbjct: 557 FEALMRWNHPRHGSLSPATFITVAEQTGHVGLLGDFALREAGACVRRFGEAGLLTPGLRF 616

Query: 678 SINLSPQDLMSERTLQHLEAAIKSVADPA-RVGLEVLESEQIKDYGRMIEVCNHFRTLGA 736
            +N+SP  LM++  L  +E+ + +V+ P  R+ LEV ES  I     ++         G 
Sbjct: 617 GVNISPAHLMAQDFLSDIESVLDAVSVPGDRITLEVTESALISTGAELMGRLETLAKRGL 676

Query: 737 TIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAKTV 796
              +DD+G+GYSNI  +     +VIK+D SLI  +    + R I    V+L   L  K V
Sbjct: 677 NFAIDDYGAGYSNIQYLASEHFRVIKIDKSLIDEVHLRDRMRAIVRSTVQLAHSLGCKIV 736

Query: 797 AEFVHNQTVCRISEDMGVDYLQGYFLGRP 825
           AE V       +   +G DYLQGY   RP
Sbjct: 737 AEGVETHAQANLLARLGCDYLQGYLFSRP 765