Pairwise Alignments

Query, 829 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  132 bits (331), Expect = 1e-34
 Identities = 128/514 (24%), Positives = 230/514 (44%), Gaps = 34/514 (6%)

Query: 334 CYCWGELLYEHGQQQVMHHSMTFLALREGAVRDDLVPIPL-PSYPEGMTSPLFNLIRHAF 392
           CY  G+ L    +     +   F  +R G     +  I L  + P  +   + N++ H  
Sbjct: 343 CYAVGQSLASLLKAGEQLNQAVFHCMRLGETTPQVAKIKLLTATPRVIERSISNVLNH-- 400

Query: 393 HDLDAMTDNLAQQIRAQTSLLTASYRR----DRRTGLPNRVVLRERLANFAANEHLIA-- 446
            D +     +  +   Q  LL    ++    D  TGL NR    E+L  FA+    IA  
Sbjct: 401 -DKEITGTVVVLRDITQEELLKRQLQKRANFDGITGLLNRQAFEEQLPQFASQAKRIAVC 459

Query: 447 -LKVTHFNQINEKYGYPVGDKLLRDLSEQFQVFLDQKLAGQSGLYAIGVGEWATVFRAKL 505
            L +  F  IN+  G+  GD++L  ++   Q      L  Q+ L  +G  E+  V     
Sbjct: 460 YLDLEQFKLINDSCGHTAGDRMLVLVARAIQ----SCLGPQTLLARLGGDEFGLVI-CDS 514

Query: 506 DGKSIHSHFYQFVEQLEHVNFEPYGLPNVDY---LSISLCAGLVSQGDFAEHSPDELLLR 562
              S+     Q + Q   V+ +     N +Y   LSI +  G     +  E   D  +  
Sbjct: 515 TALSVAQQLKQIIAQ---VSLQVLHDKNCNYKVGLSIGVAFGRAPYINALELLKDADIA- 570

Query: 563 AIEARRYAFNNNHHFCNAARLKVQESVRQERLNWLSRVSRAVVRDDVVVYAQPICQ-ARS 621
            I A+    N  H + +  +   + + ++    W  R+++A+  +++++Y QPI     S
Sbjct: 571 CIAAKAKGTNQIHFYDDKDK---ELTYQRNAPKWAVRIAQAIEENELLLYYQPIRGLGAS 627

Query: 622 HIVASYECLVRIEDE-GEIILPGNFLPIITDTHLYTRLSRQMITHTFNMMRHRPEAF--- 677
                 E L+RI++  G I+ P  F+       L   + +++I   F  +   P+ +   
Sbjct: 628 SKRQRMEILLRIQEPCGRILAPAQFIAAAERFKLMPEIDKEVIRKAFLWLSLNPQLWPDH 687

Query: 678 --SINLSPQDLMSERTLQHLEAAIKSVADPAR-VGLEVLESEQIKDYGRMIEVCNHFRTL 734
             SINLS   L +E  ++++         P++ V  E+ E+  I++  R +E+    R L
Sbjct: 688 CISINLSGNSLGAEGMVEYIAQQQHIFDIPSQCVCFEITETTAIQNRQRGMEMLRQLRKL 747

Query: 735 GATIIVDDFGSGYSNIDEIVKLEPQVIKLDGSLIRNIDQDVKQRRIAEQLVKLCQVLNAK 794
           G +  +DDFGSG+++   + +L    +K+DG  ++N+  + K   I + +  +C+V+  +
Sbjct: 748 GFSFALDDFGSGFASYGYLRELPVDYVKIDGCFVKNLAVNAKDYAIVKSIQDVCRVMGIE 807

Query: 795 TVAEFVHNQTVCRISEDMGVDYLQGYFLGRPSRL 828
           TVAEFV NQ +    + +G++Y QGY +GRP  L
Sbjct: 808 TVAEFVENQEIIDRLQVIGINYAQGYAIGRPQPL 841