Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., tyrosine recombinase XerC from Pseudomonas stutzeri RCH2

 Score =  250 bits (639), Expect = 3e-71
 Identities = 130/296 (43%), Positives = 200/296 (67%), Gaps = 3/296 (1%)

Query: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQGKRQG 76
           L+ ++ +L + + LS ++   Y++ L  +  +  +  +  W  L    +RQL+ +  RQG
Sbjct: 5   LDAYFEHLRSARQLSGHSLEGYRRDLNKLLAHCEREQIADWRGLQGRHLRQLIAELHRQG 64

Query: 77  MKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEV-T 135
             + S+A  LSS+R    +L   G  Q +PA G+SAP+ +R LPK LD D   QLL+   
Sbjct: 65  QSSRSLARLLSSVRGLYRYLNQEGICQHDPAAGLSAPKGERRLPKLLDTDRAMQLLDGGV 124

Query: 136 DDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQ 195
           +DD +++RD+A++EL Y +GLRL+ELV +++  ++L  G +RV+GKGNK R++    +A+
Sbjct: 125 EDDFIALRDQAMLELFYSSGLRLSELVGLNLDQLDLPAGLVRVLGKGNKVRELPVGRKAR 184

Query: 196 EWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHKLRHS 255
           E +  WL +R+ LA+ A+ A+F+ + G R+  R+VQ R+ + G ++ +  H+ PH LRHS
Sbjct: 185 EALQAWLPIRA-LANPADGAVFIGQQGRRLGARAVQMRVRQAGVRE-LGQHLHPHMLRHS 242

Query: 256 FATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARKKNKDD 311
           FA+H+LESS +LR+VQELLGH +I TTQIYTHLDFQHLA+VYDQAHPRA++K   D
Sbjct: 243 FASHLLESSQDLRSVQELLGHADIGTTQIYTHLDFQHLAKVYDQAHPRAKRKQDTD 298