Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., integrase/recombinase XerC (RefSeq) from Shewanella amazonensis SB2B

 Score =  291 bits (745), Expect = 1e-83
 Identities = 154/291 (52%), Positives = 201/291 (69%), Gaps = 4/291 (1%)

Query: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQGKRQG 76
           LERF  YL TE+ LS  T RNY+ +LE     L   G   W QL    +  L+ +  RQG
Sbjct: 8   LERFTRYLATERQLSPMTVRNYRFELERADTLL---GQRSWQQLSRQDLSGLMARLHRQG 64

Query: 77  MKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEVTD 136
           +   S++   S+L+ F  FL+  G +  NPA  +SAP++ +TLPKNLD D +  LL++  
Sbjct: 65  LSPRSLSLTASALKQFGQFLLKEGLIDTNPAATLSAPKQSKTLPKNLDPDSVNHLLDIPP 124

Query: 137 DDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQE 196
           +D L++RD+AIMEL Y  GLRLAEL ++D+KD++    E+RVIGKG+KER +     A  
Sbjct: 125 EDGLALRDKAIMELFYSCGLRLAELAALDVKDLDRESREVRVIGKGSKERILPVGSVALA 184

Query: 197 WVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHKLRHSF 256
            +G WLK+R+Q+    + ALFVS  G+R+SHRS+Q RM +W Q Q ++  + PHKLRHSF
Sbjct: 185 AIGDWLKVRNQMP-CQDDALFVSSRGSRLSHRSIQARMEKWAQIQGLSVGVHPHKLRHSF 243

Query: 257 ATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARKK 307
           ATHMLESS +LRAVQELLGH N+ATTQIYT LDFQHLA+VYD AHPRARKK
Sbjct: 244 ATHMLESSGDLRAVQELLGHANLATTQIYTSLDFQHLAKVYDGAHPRARKK 294