Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella loihica PV-4

 Score =  275 bits (702), Expect = 1e-78
 Identities = 137/291 (47%), Positives = 205/291 (70%), Gaps = 3/291 (1%)

Query: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQGKRQG 76
           ++ F +YL +E+ LS +T RNY+ +LE + + L +  +  W ++    ++ ++ +  R+G
Sbjct: 6   VQEFVSYLVSERQLSPHTVRNYRFELERVGELLPENFI--WAEVSDEQLQAVLNKLHRKG 63

Query: 77  MKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEVTD 136
           +   SIA  LS+L+ F  +L+  G ++ +P   +SAP++Q+ LPKN+D+D +  LL +  
Sbjct: 64  LGPRSIALTLSALKQFCHYLLQEGYIKKDPCLNLSAPKQQKPLPKNMDLDSVTHLLSIEG 123

Query: 137 DDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQE 196
           DD L++RD+AIMEL Y +GLRLAEL ++D +D+   E +++V+GKG+KER V     A  
Sbjct: 124 DDALALRDKAIMELFYSSGLRLAELAALDTRDIASGEHQVKVMGKGSKERIVPIGRMALS 183

Query: 197 WVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHKLRHSF 256
            +  WLK+RS L    + ALFV+  G R++HRS+Q R+ +WGQ Q + + + PHKLRHSF
Sbjct: 184 AIDDWLKVRS-LLPCEDDALFVTAKGKRLAHRSIQARLNKWGQLQGLNARVHPHKLRHSF 242

Query: 257 ATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARKK 307
           ATHMLESS +LRAVQELLGH N++TTQ+YT LDFQHLA+VYD AHPRA+K+
Sbjct: 243 ATHMLESSADLRAVQELLGHANLSTTQVYTSLDFQHLAKVYDGAHPRAKKR 293