Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., site-specific tyrosine recombinase XerD from Pantoea sp. MT58

 Score =  176 bits (445), Expect = 8e-49
 Identities = 103/293 (35%), Positives = 175/293 (59%), Gaps = 9/293 (3%)

Query: 18  ERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLV--QVGLTHWTQLDSAWVRQLVMQGKRQ 75
           E+F   L  E+ L+  T  +Y+Q L+T+T +L   Q+ L   T LD   ++Q + +    
Sbjct: 8   EQFLDALWIERNLAQNTLSSYRQDLQTLTGWLAHHQLTLLSVTPLD---LQQFLAERLEG 64

Query: 76  GMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEVT 135
           G KA+S A  LS++R    +L        +P+  +SAP+  + LPK+L   ++ +LL+  
Sbjct: 65  GYKATSSARLLSAMRRLFQYLYREKLRPDDPSALLSAPKLPQRLPKDLSEAQVERLLQAP 124

Query: 136 DDD-PLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQA 194
           + D PL +RD+A++EL+Y  GLR++EL+ + + D++L +G +RVIGKG+KER V    +A
Sbjct: 125 NIDIPLELRDKAMLELLYATGLRVSELIGLTLSDISLRQGVVRVIGKGDKERLVPLGEEA 184

Query: 195 QEWVGKWLKLRSQLADSAET--ALFVSKLGTRISHRSVQKRMAEWGQKQAVASH-ISPHK 251
             W+ ++++       + +T   +F S    +++ ++   R+  +     + S  +SPH 
Sbjct: 185 VYWLEQYMEHGRPWLLNGQTLDVMFPSNRAQQMTRQTFWHRIKHYATLAGIDSEKLSPHV 244

Query: 252 LRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRA 304
           +RH+FATH+L    +LR VQ LLGH +++TTQIYTH+  + L Q++ Q HPRA
Sbjct: 245 MRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 297