Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  174 bits (440), Expect = 3e-48
 Identities = 105/291 (36%), Positives = 163/291 (56%), Gaps = 2/291 (0%)

Query: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLVQVGLTHWTQLDSAWVRQLVMQGKRQG 76
           ++R+  +L  E+GL+  T   Y   L  +  +L + G     ++D   +   V+  +R+G
Sbjct: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCL-LAEVDEQTLFMHVVDLRRRG 59

Query: 77  MKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEVTD 136
           M   ++A  L++LR F  F +  GEL+A+PA  +  P+  R LP  L  DEMA +L   D
Sbjct: 60  MAGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPD 119

Query: 137 -DDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQ 195
             D L  RDR ++ELMY AGLR++EL ++   D +   G +RV GKG KER V     + 
Sbjct: 120 LSDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSC 179

Query: 196 EWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPHKLRHS 255
             V  +L+         E A+F+++ G  +S ++V K +     +  +   ISPH  RHS
Sbjct: 180 ALVTAYLRDWRPAFSPVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKDISPHTFRHS 239

Query: 256 FATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARK 306
           FATH+LE   +LR+VQ LLGH +I+ T+IYTH+    L ++++  HPR R+
Sbjct: 240 FATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPRTRR 290