Pairwise Alignments

Query, 311 a.a., tyrosine recombinase XerC from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella sp. ANA-3

 Score =  296 bits (757), Expect = 5e-85
 Identities = 148/297 (49%), Positives = 214/297 (72%), Gaps = 15/297 (5%)

Query: 17  LERFYAYLHTEKGLSLYTQRNYKQQLETMTQYL------VQVGLTHWTQLDSAWVRQLVM 70
           L++F  Y+ +E+ LS +T RNY  +L+  ++ L      + VG  HW        +Q++ 
Sbjct: 9   LQQFETYMQSERQLSAHTVRNYMYELQRGSELLPEGVDLLNVGREHW--------QQVLA 60

Query: 71  QGKRQGMKASSIATRLSSLRSFLDFLILRGELQANPAKGVSAPRKQRTLPKNLDVDEMAQ 130
           +  R+G+   S++  LS+++ + +FL+  G ++ NPAKG+SAP++ + LPKN+DVD ++ 
Sbjct: 61  KLHRKGLSPRSLSLWLSAIKQWGEFLLRSGVIELNPAKGLSAPKQAKPLPKNIDVDSISH 120

Query: 131 LLEVTDDDPLSIRDRAIMELMYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWF 190
           LL +  +DPL++RD+AIMEL Y +GLRLAEL ++D+  V   + E+RV+GKGNKER V  
Sbjct: 121 LLAIEGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQHEVRVLGKGNKERIVPV 180

Query: 191 AGQAQEWVGKWLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPH 250
              A E +  WLK R Q++   + ALFV++ G R+SHRS+Q RM++WGQ+QA++  + PH
Sbjct: 181 GRYAIEAISAWLKCRKQIS-CEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPH 239

Query: 251 KLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQAHPRARKK 307
           KLRHSFATHMLESS +LRAVQELLGHEN++TTQIYT LDFQHLA+VYD AHPRA+K+
Sbjct: 240 KLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKKQ 296