Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  162 bits (410), Expect = 7e-45
 Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 10/275 (3%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF 60
           M  +F KMH  G+DF++VD        +  + +R+ DR+ GVGF+QL V+    D  +D 
Sbjct: 1   MPLNFQKMHANGDDFVIVDSRHSANPVTSAMAQRMGDRNRGVGFNQLAVLLDCDD--ADA 58

Query: 61  HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM 120
               +NADGS ++ CG+  R  A  +  +   N  ++ + T +G +         I+V+M
Sbjct: 59  RVMFWNADGSALDVCGSATRGAADMLMREA--NVASVALRTNRGLLTCERTPTGDISVDM 116

Query: 121 GVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPL 180
           GVP F+ + IP  A++ + T +   G       A SMGNPH    VDD+ T  + T+GP 
Sbjct: 117 GVPLFDWSDIPL-AQELDTTVLPLAGSPV----ACSMGNPHCTYFVDDLATVDIATIGPA 171

Query: 181 LESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQV 240
           +E++  FP + N  F+Q++ R  I LR++ERGAG     GS +C AV  GI +GLLD +V
Sbjct: 172 IETNALFPLKTNVHFVQIIDRTHIRLRIWERGAGIALGSGSCSCGAVVNGIRRGLLDPRV 231

Query: 241 RVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQIS 275
            V   GG + + W G G  +++ GP    + G +S
Sbjct: 232 EVECDGGSVTVQWDGVG-AVFLIGPVEVSFSGTMS 265