Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  229 bits (585), Expect = 4e-65
 Identities = 124/270 (45%), Positives = 159/270 (58%), Gaps = 1/270 (0%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           F+KMHG GNDF+V+D           L  RLADRH GVG DQ+L +E P   E+   YRI
Sbjct: 12  FTKMHGAGNDFVVLDLRNGTPPPDASLAARLADRHFGVGCDQILTIETPRSAEAVAAYRI 71

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 124
           +N+DGS  +QCGNGARC A ++  +G        + +      +   +    +V MGVP+
Sbjct: 72  WNSDGSHSQQCGNGARCVAAWLVREGTAQGDVFTIDSPFTAHRVERLDAGTYSVAMGVPQ 131

Query: 125 FEPNKIPFRA-KQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLES 183
           FEP +IP      +   Y L V   T+  GAVSMGNPH V  V  +  A VE +G LL+ 
Sbjct: 132 FEPTQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALLQQ 191

Query: 184 HERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVH 243
           +  FPE VN GF QVV    + LRVYERG GET ACGSGACAA  V + +G ++  VRV 
Sbjct: 192 NAAFPESVNVGFAQVVDPAHVRLRVYERGVGETLACGSGACAAAVVLMHRGRVERDVRVS 251

Query: 244 LPGGELEIHWQGPGKPLYMTGPATHIYDGQ 273
           LPGGEL I W G    + M+GPA  ++DG+
Sbjct: 252 LPGGELRIRWAGEQAQVVMSGPAVFVFDGE 281