Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., diaminopimelate epimerase from Sinorhizobium meliloti 1021

 Score =  155 bits (391), Expect = 1e-42
 Identities = 97/276 (35%), Positives = 146/276 (52%), Gaps = 9/276 (3%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           F++M+GLGN  +VVD   +    +P+    L +      FDQ++ +  P    +D    I
Sbjct: 12  FARMNGLGNKILVVDMRGRKDRVTPQAAIAL-NADPATEFDQIMAIHDPKSAGTDAWIDI 70

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVPE 124
            N+DGS  + CGNG RC  + +  +     +  H  T  G +     +   I+V+MG P 
Sbjct: 71  VNSDGSMAQACGNGTRCVVQALAAETGRKAFLFH--TVAGLLEAKEHDNGTISVDMGKPR 128

Query: 125 FEPNKIPFRAKQSEKTYI-LRVGE---HTLFCGAV-SMGNPHVVTVVD-DIRTAAVETLG 178
           F  ++IP   +  +   I L++G      L   +V SMGNPH +  V+ D+ +  ++  G
Sbjct: 129 FGWDQIPLAEEFHDTRRIELQIGPIDAPVLHSPSVASMGNPHAIFWVENDVWSYELDRFG 188

Query: 179 PLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDE 238
           PLLE+H  FPER N    ++ SR E++LR +ERGAG T ACGS ACAA   G   G  + 
Sbjct: 189 PLLENHPIFPERANISIARIRSRQEMDLRTWERGAGLTLACGSAACAAAVNGARTGRTER 248

Query: 239 QVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
            V V++PGG L+I W+     + MTGPA   + G +
Sbjct: 249 MVTVNVPGGPLKIEWRERDDHVIMTGPAEWEWSGTV 284