Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., diaminopimelate epimerase (RefSeq) from Shewanella amazonensis SB2B

 Score =  392 bits (1006), Expect = e-114
 Identities = 191/271 (70%), Positives = 216/271 (79%)

Query: 4   HFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYR 63
           HF+KMHGLGNDFMVVD +TQNVFFSPE IRRLADR+ G+GFDQLL+VE PYDP+ DFHYR
Sbjct: 3   HFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFHYR 62

Query: 64  IFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVP 123
           IFNADGSEVEQCGNGARCFARFVR KGLT K+ I VST  GKM L +E +  +TVNMGVP
Sbjct: 63  IFNADGSEVEQCGNGARCFARFVRNKGLTQKHKIKVSTSAGKMTLRLERDGGVTVNMGVP 122

Query: 124 EFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLES 183
             +P +IPF+AK+ EKTY+L+  + T  CGAVSMGNPHVV  VDDI  A V  +G  L  
Sbjct: 123 ILDPAQIPFKAKKFEKTYLLQSAQQTFLCGAVSMGNPHVVLEVDDITQAPVADVGAQLTR 182

Query: 184 HERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLLDEQVRVH 243
           HERFP+ VN GFMQVV+ D I LRVYERGA ET ACGSGACAA  VG LQG L  +VRV 
Sbjct: 183 HERFPKGVNVGFMQVVAPDHIKLRVYERGAAETLACGSGACAAAVVGQLQGKLGSRVRVD 242

Query: 244 LPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
           LPGG L I+W+G GKPL+MTGPA  +YDGQI
Sbjct: 243 LPGGSLTINWEGEGKPLWMTGPAQQVYDGQI 273