Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., diaminopimelate epimerase from Rhodopseudomonas palustris CGA009

 Score =  157 bits (397), Expect = 3e-43
 Identities = 103/279 (36%), Positives = 146/279 (52%), Gaps = 19/279 (6%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           F+KM+G+GN+ +VVD   Q    +P   R +A     V +DQL++++      ++   RI
Sbjct: 9   FAKMNGIGNEIVVVDLRDQPAPVTPADARAVAAH---VPYDQLMLLQPARLSGTEAFVRI 65

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNV---EEEDLITVNMG 121
           +N DGSE   CGNG RC AR  +M   + K  +   T+ G  +LN      + L TV+MG
Sbjct: 66  YNNDGSESGACGNGMRCVAR--QMFSGSEKNGLTFETRAG--LLNCWRGPADGLYTVDMG 121

Query: 122 VPEFEPNKIPFRAKQSEKTYI-LRVGE------HTLFCGAVSMGNPHVVTVVDDIRTAAV 174
            P+F    IP   +  +   I L++G       HT     VSMGNPH +  VDD+    +
Sbjct: 122 EPKFGWQDIPLAEEFRDTRMIELQIGPIDAPVLHTP--SVVSMGNPHAIFWVDDVNAYDL 179

Query: 175 ETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQG 234
              GPLLE+H  FPER N     +V R  I +R +ERGAG T+ACGS AC+         
Sbjct: 180 GRFGPLLENHPIFPERANITLAHIVDRQHITMRTWERGAGLTKACGSAACSTAVAAARLK 239

Query: 235 LLDEQVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQ 273
             D  V + LPGG+L I W+     + MTG A   ++G+
Sbjct: 240 RTDRTVEMTLPGGQLTIEWRESDNHVLMTGGAAFEFEGR 278