Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., Probable diaminopimelate epimerase DapF (DAP epimerase) from Mycobacterium tuberculosis H37Rv

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 26/265 (9%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPES------ 58
           F+K HG  NDF+++  +   +  +   +  L DR  G+G D +L V      ++      
Sbjct: 3   FAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDS 62

Query: 59  --------DFHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNV 110
                   D++    NADGS  + CGNG R FA ++R  GL  +    V +  G   +  
Sbjct: 63  LPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPVTC 122

Query: 111 EEEDLITVNMGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIR 170
              +    ++ V   + N++              VG       AV +GNPH+  V   + 
Sbjct: 123 HHVEAAYADVSVDMGKANRLGAGEAV--------VGGRRFHGLAVDVGNPHLACVDSQLT 174

Query: 171 T---AAVETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSG-ACAA 226
               AA++   P+     +FP+ VN   +       + +RV+ERG GET++CG+G   AA
Sbjct: 175 VDGLAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAA 234

Query: 227 VAVGILQGLLDEQVRVHLPGGELEI 251
           VA     G     + VH+PGGE+ +
Sbjct: 235 VAALAAVGSPTGTLTVHVPGGEVVV 259