Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., diaminopimelate epimerase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  123 bits (309), Expect = 4e-33
 Identities = 90/273 (32%), Positives = 124/273 (45%), Gaps = 17/273 (6%)

Query: 7   KMHGLGNDFMVVD--CITQNVFFSPELIRRLADRHTGVGFDQLLVV-EAPYDPESDFHYR 63
           K+HG GNDF+ +D   +   V   P+  R +  R  GVG D L+ + E P D E D+ + 
Sbjct: 12  KLHGCGNDFVFIDNRALGLPVAAMPDWARSVCRRAFGVGADGLVFLDETPKDREGDYIWH 71

Query: 64  IFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNMGVP 123
            +NADGS  E CGN +RC A      G      +   T  G     +  E  +   M   
Sbjct: 72  FYNADGSRAEMCGNASRCAALLAVELGFAGPKHV-FGTDAGL----IRAEADVAAGMAKV 126

Query: 124 EFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVETLGPLLES 183
           E  P       +       L +GE       V+ G PH V    D  T  V TLG  L  
Sbjct: 127 ELTP------PRDLTLGIELDLGEGRDMVHFVNTGVPHAVVFKRDASTVDVRTLGAALRR 180

Query: 184 HERF-PERVNAGFMQVVSRDEINLRVYERGA-GETQACGSGACAAVAVGILQGLLDEQVR 241
           H  F P   NA F QV+ R  I+LR +ERG   ET ACG+GA A   +    GL +  V 
Sbjct: 181 HAHFAPAGTNANFAQVIDRRNIHLRTFERGVEDETYACGTGAAAGAFIAHALGLAESTVN 240

Query: 242 VHLPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
           V   GGE+ +     G  ++++G A  ++ G++
Sbjct: 241 VRSSGGEI-LGISIEGGSVFLSGKAVRVFSGEM 272