Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis JJ

 Score =  220 bits (561), Expect = 2e-62
 Identities = 114/278 (41%), Positives = 175/278 (62%), Gaps = 13/278 (4%)

Query: 5   FSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDFHYRI 64
           F+KMHGLGND++ VD I+Q +    E+ + ++DRH G+G D L+++  P D  +DF  R+
Sbjct: 3   FTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLI-LPSDV-ADFKMRM 60

Query: 65  FNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEED----LITVNM 120
           FN+DGSE E CGN  RC  +FV  K +T+K TI + T  G  VL +  E+    L+ V+M
Sbjct: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTVENGKVVLVKVDM 120

Query: 121 GVPEFEPNKIPFRAKQSEKTYIL----RVGEHTLFCGAVSMGNPHVVTVVDDIRTAAVET 176
           G P  +  +IP     SEK  ++       +++ +   VSMGNPH +T ++++    +E 
Sbjct: 121 GEPILKAEEIPVL---SEKHPVIDEEITAKDYSYYFTCVSMGNPHAITYIENVSEFPLEK 177

Query: 177 LGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQGLL 236
           +GPL E HE+FP + N  F++++ ++ + +RV+ERGAGET ACG+GACA +   IL+G +
Sbjct: 178 IGPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLVASILKGYV 237

Query: 237 DEQVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQI 274
             +  V L GG+L I W      +YMTGPAT +++G+I
Sbjct: 238 GRKSTVKLLGGDLIIEWNENDNHIYMTGPATTVFEGEI 275