Pairwise Alignments

Query, 276 a.a., diaminopimelate epimerase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., diaminopimelate epimerase from Burkholderia phytofirmans PsJN

 Score =  294 bits (753), Expect = 1e-84
 Identities = 150/283 (53%), Positives = 188/283 (66%), Gaps = 9/283 (3%)

Query: 1   MHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQLLVVEAPYDPESDF 60
           M   F+KMHG GNDF+V+D  TQ V  +P  +R LADRH GVG DQLL+VE P     DF
Sbjct: 1   MKLKFTKMHGAGNDFVVLDGYTQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDF 60

Query: 61  HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKMVLNVEEEDLITVNM 120
            YRIFN DG EVE CGNGARCF +FVR  GLT++ ++ V  +KG + L ++E   + V+M
Sbjct: 61  RYRIFNCDGGEVEHCGNGARCFVKFVRDSGLTDQRSVRVQVQKGTITLTMQENGEVLVDM 120

Query: 121 GVPEFEPNKIPF-------RAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVVDDIRTAA 173
           G P F+P ++PF       R + ++  + L V   T +   VSMGNPH V VVDD+    
Sbjct: 121 GTPVFDPERVPFATKGLQGRGEGADTLWPLDVNGTTRWISVVSMGNPHAVQVVDDVEAFP 180

Query: 174 VETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAAVAVGILQ 233
           V   GP++E H RFP+RVNAGFMQ+V R EI LRVYERGAGET ACG+GACAAVA GI +
Sbjct: 181 VLVEGPVIERHARFPQRVNAGFMQIVGRSEIKLRVYERGAGETLACGTGACAAVAAGIRR 240

Query: 234 GLLDEQVRVHLPGGELEIHWQG--PGKPLYMTGPATHIYDGQI 274
           GLLD  V VH  GG+L I W      +PL M GPA  +++G+I
Sbjct: 241 GLLDAPVLVHTHGGKLTITWDAAQADQPLLMAGPAATVFEGEI 283