Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., diaminopimelate DAP decarboxylase from Sinorhizobium meliloti 1021

 Score =  403 bits (1035), Expect = e-117
 Identities = 211/419 (50%), Positives = 287/419 (68%), Gaps = 7/419 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           M++F Y+ DG L+AE VPL ++A   GTP Y YS ATLERH+  F ++  D   ++CYA+
Sbjct: 1   MNHFQYR-DGILYAEDVPLTEIARAVGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAM 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSN  VL TL RLG+G D+VS GEL R LAAG    +++FSGVGKT  EM  AL+  I
Sbjct: 60  KANSNQAVLKTLGRLGAGLDVVSEGELRRALAAGIPAGRIMFSGVGKTAREMDFALEAGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFNVESEPEL+ LN+ A   G +AP+S RINPDVDA+TH  ISTG ++NKFGI+++RA 
Sbjct: 120 YCFNVESEPELEVLNQRAVRAGRRAPVSFRINPDVDARTHAKISTGKKENKFGISWERAR 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            VY  A  LP ++V GID HIGSQ+T L PF DA   L  L+D+L+++G  I H+D+GGG
Sbjct: 180 GVYAHAAELPGIEVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHVIEHVDIGGG 239

Query: 241 LGVVYRDE--LPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           LG+ YR++   PP P  YA  + ++L +  D +++ EPGR I  NAG+LVT+V ++K   
Sbjct: 240 LGIPYREDNNPPPLPDAYADIVKNQL-KGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGG 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTY--DLVGPVCETSDFLGKDRDL 356
            K F I+D AMNDLIRP LY+A+ +I P++     A     D+VGPVCET D+L  DR++
Sbjct: 299 DKTFVIVDGAMNDLIRPTLYEAYHEIRPVKISAASAPRIKADVVGPVCETGDYLALDREM 358

Query: 357 VL-QEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESV 414
            + + GDL A+ S+GAYG   +  YN+R  V EV+V G++ +++R R +   L  L+SV
Sbjct: 359 AMPKPGDLFAIGSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRRDYDELIGLDSV 417