Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  546 bits (1406), Expect = e-160
 Identities = 276/416 (66%), Positives = 324/416 (77%), Gaps = 2/416 (0%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           MD+F Y+E+ +L+AE+  +A LA ++GTPLYVYSRATLERHWHAFD +V  +PHLICYAV
Sbjct: 1   MDHFLYREE-RLFAEECDVAGLAAEHGTPLYVYSRATLERHWHAFDGAVASHPHLICYAV 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSNL VLN LARLGSGFDIVS GEL RVL AGGDP+KVVFSGVGKT AEM+ AL   I
Sbjct: 60  KANSNLAVLNVLARLGSGFDIVSGGELSRVLEAGGDPAKVVFSGVGKTVAEMELALNTGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFN+ES  EL+ LN+VAG LG  AP+SLR+NPDVDA THPYISTGL++NKFGI  + A 
Sbjct: 120 MCFNLESGAELELLNEVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIPMEEAE 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            ++  A +LPNL V G+DCHIGSQLT L PF+DA DR+LALID L  +GI I H DVGGG
Sbjct: 180 ALFARAAALPNLAVKGVDCHIGSQLTELKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGG 239

Query: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300
           LGV Y  E PP P  YA A+L++L   R L+LIFEPGRAIAANAG+ VT+V + K    K
Sbjct: 240 LGVTYNGETPPHPDVYAAAILEKL-NGRPLKLIFEPGRAIAANAGIFVTQVLYTKDNGDK 298

Query: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE 360
            F I+D AMNDLIRP+LY AWQ+IIP           D+VGPVCET DFLGKDR+L    
Sbjct: 299 RFVIVDGAMNDLIRPSLYGAWQNIIPAVKTNEPTTRCDVVGPVCETGDFLGKDRELAAGS 358

Query: 361 GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLP 416
           GDLL VRS+GAYGFTM+SNYNTRPR AE+MVDG+K Y+VR+RE+LS LW  E +LP
Sbjct: 359 GDLLVVRSAGAYGFTMASNYNTRPRAAELMVDGDKAYVVREREKLSQLWQGEQLLP 414