Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., Diaminopimelate decarboxylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  370 bits (949), Expect = e-107
 Identities = 206/421 (48%), Positives = 274/421 (65%), Gaps = 7/421 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           MDYF+Y+ +GQL AE V LA +A   GTP YVYS ATLERH+  F  +    P  +C+A 
Sbjct: 1   MDYFSYR-NGQLHAEDVALAAIAEAVGTPFYVYSAATLERHFRVFSDAFAGQPITLCFAT 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           K N N  VL  LA LG+G D+VS GE+E  LAAG    ++VFSGV KT+AEM  AL+  I
Sbjct: 60  KTNGNKAVLALLAGLGAGADVVSQGEMEHALAAGVPAGRIVFSGVAKTKAEMAAALEAGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
              NVESEPEL+ L++VA  LG  AP++LRINPDV A TH  I+TG ++NKFGI +  A 
Sbjct: 120 FQINVESEPELEALSEVAQALGKTAPVALRINPDVAAATHDKIATGRKENKFGIDWTVAP 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            ++  A  LP + V G+  HIGSQ+  L PF  A +RL  L+ +L+A+GI +  +D+GGG
Sbjct: 180 AIFAKAAGLPGIAVKGVAVHIGSQILDLDPFRRAFERLRELVLALRADGIALERVDLGGG 239

Query: 241 LGVVYR--DELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           LG+ Y   D   P P+EYA AL  R+     + L+ EPGR IA NAG+LV++V + K  E
Sbjct: 240 LGIPYHRDDPASPPPAEYA-ALARRIFGDLGVHLVAEPGRLIAGNAGMLVSRVVYRKQGE 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL 356
            + F I+DA  NDLIRPA+Y A+ DI+P+      A     D+VGP+CE+ D   + R L
Sbjct: 299 TRTFLILDAGFNDLIRPAMYDAFHDILPVTAAAENAVLTPVDVVGPICESGDIFARQRPL 358

Query: 357 -VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVL 415
             +  GDL+A  ++GAYG +MSS YN RP V EVMV G++  +VR+R  ++ + ALESV 
Sbjct: 359 PPIAAGDLVAFATAGAYGASMSSTYNGRPLVPEVMVSGDRFAVVRRRPSVAEMTALESVP 418

Query: 416 P 416
           P
Sbjct: 419 P 419