Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., diaminopimelate decarboxylase LysA from Phaeobacter inhibens DSM 17395

 Score =  403 bits (1035), Expect = e-117
 Identities = 215/413 (52%), Positives = 289/413 (69%), Gaps = 7/413 (1%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           MD+F Y+ DG L+AE VP+A++A   GTP Y+YS ATL RH++ FD ++    HL+CYA+
Sbjct: 1   MDHFLYR-DGALYAEDVPVAEIAATVGTPFYLYSTATLLRHFNLFDDALKGMDHLVCYAM 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KA SN  +L TLA+ G+G D+VS GE  R  AAG    ++VFSGVGKT+ E++ AL   I
Sbjct: 60  KAASNQAILKTLAQAGAGMDVVSQGEYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
           + FNVESEPE+  +N VA ELGV API++R+NPDVDAKTH  I+TG  +NKFGI   RA 
Sbjct: 120 RQFNVESEPEMDVINAVALELGVVAPITVRVNPDVDAKTHAKIATGKSENKFGIPIARAR 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
           +VY  A SLP L V GID HIGSQLT LAPF  A  ++  L + L+A+G  I  LD+GGG
Sbjct: 180 EVYARAASLPGLKVIGIDVHIGSQLTELAPFELAYQKVAELTEQLRADGHDIHRLDLGGG 239

Query: 241 LGVVY--RDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE 298
           LG+ Y   ++ PP P EY  A++ R   H   E+  EPGR IA NAG++V+KV ++K  E
Sbjct: 240 LGIPYTRSNDTPPLPVEYG-AMVQRTLGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGE 298

Query: 299 HKNFAIIDAAMNDLIRPALYQAWQDIIP-LRPRQG-EAQTYDLVGPVCETSDFLGKDRDL 356
            ++F IID AMNDLIRPA+Y+A+ DI+P + P  G E + YD+VGPVCET D   + RD+
Sbjct: 299 DRDFLIIDGAMNDLIRPAMYEAYHDIVPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDM 358

Query: 357 -VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSL 408
             L+ GDL+A RS+GAYG  M+S YN+RP + EV+V+G++  ++R+R +   +
Sbjct: 359 PPLEAGDLVAFRSAGAYGAVMASEYNSRPLIPEVLVNGDQFAVIRRRPDFDEM 411