Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella loihica PV-4

 Score =  569 bits (1466), Expect = e-167
 Identities = 286/416 (68%), Positives = 333/416 (80%), Gaps = 2/416 (0%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           MD+F YQ+D +L+AEQ  +A LA  YGTPLYVYSRATLERHWHAFD +V D+PH+ICYAV
Sbjct: 1   MDHFLYQQD-ELYAEQCTVASLAETYGTPLYVYSRATLERHWHAFDNAVADHPHMICYAV 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSNL VLN LARLGSGFDIVS GEL RVL AGG+ SKVVFSGVGKT AEM+ AL+  I
Sbjct: 60  KANSNLAVLNVLARLGSGFDIVSGGELARVLEAGGEASKVVFSGVGKTVAEMEMALEAGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFNVES  EL++LN VA  LG  AP+SLR+NPDVDA THPYISTGL++NKFGI  + A 
Sbjct: 120 YCFNVESAAELEQLNLVALRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMEEAE 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            ++  A+ LP L V G DCHIGSQLT L PF+DA DR+LALID L  +G+ I HLDVGGG
Sbjct: 180 AIFLRANELPGLAVKGADCHIGSQLTELQPFLDAMDRMLALIDRLAEQGVKIAHLDVGGG 239

Query: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300
           LGV Y  E PP+PS YA ALL +L   RDL+LIFEPGRAIAANAG+ VT+V +LK    K
Sbjct: 240 LGVTYDGEQPPEPSAYASALLGKL-AGRDLKLIFEPGRAIAANAGIFVTQVLYLKENAEK 298

Query: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE 360
           NFA++D AMNDLIRP+LY AWQ IIP+ PR GE + YD+VGPVCET DFLGKDR L ++ 
Sbjct: 299 NFALVDGAMNDLIRPSLYSAWQKIIPVVPRPGETRQYDVVGPVCETGDFLGKDRALNIRA 358

Query: 361 GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLP 416
            DLLAVRSSGAYGFTM+SNYN+RPR AEVMVDG + YLVR+RE+++ LW  E +LP
Sbjct: 359 NDLLAVRSSGAYGFTMASNYNSRPRAAEVMVDGERHYLVREREKVAQLWQGEQLLP 414