Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., diaminopimelate decarboxylase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  167 bits (422), Expect = 7e-46
 Identities = 131/408 (32%), Positives = 204/408 (50%), Gaps = 29/408 (7%)

Query: 21  DLANQYGTPLYVYSRATLERHWHAFDKSVGDYP-HLICYAVKANSNLGVLNTLARLGSGF 79
           +LA  +G+PLYVYS A L +      K++  +P   + Y+ KAN+NL +L  +   G   
Sbjct: 22  ELAAAFGSPLYVYSEALLRKRCRDM-KALSSHPGFFVNYSAKANTNLSLLRIVREEGLVV 80

Query: 80  DIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAG 139
           D +S GE+    AAG  P ++++     +EAE+  A+   +   +V+S  +L+ L +V  
Sbjct: 81  DAMSPGEIHVNKAAGFTPDQILYVCNNVSEAELANAVSHGL-LVSVDSLSQLETLGRV-- 137

Query: 140 ELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQV-YRLAHSLPNLDVHGID 198
             G K  + +R NP + A  H  + T  +  KFG+    A+    R   +  ++ + GI+
Sbjct: 138 NRGGK--VMVRFNPGIGAGHHQKVVTAGKATKFGVDPSEASLAELRAILARHDMTLAGIN 195

Query: 199 CHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQP----- 253
            HIGS       ++ A D LL++ +        +  +D GGG G+ YR +   QP     
Sbjct: 196 QHIGSLFLEPEGYVAAADFLLSVAEKFDT----VEVIDFGGGFGIPYR-KYEDQPRLDLA 250

Query: 254 --SEYAKALLDRLERHRDLELIF--EPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAM 309
             +E   AL+         +  F  EPGR + A  G+L+  V   K+     +   D   
Sbjct: 251 ATAERLHALISGWSERTGYKGRFYIEPGRYVVAECGLLLGTVHATKNNGPTRYVGTDLGF 310

Query: 310 NDLIRPALYQAWQDIIPLRPR---QGEAQTYDLVGPVCETSDFLGKDRDL-VLQEGDLLA 365
           N L RP +Y A  DI   R             +VG +CE+ D + ++R L  +QEGD+L 
Sbjct: 311 NVLARPVMYDAHHDIEVYRNNGTPDAALHPQTVVGNICESGDIMARERQLPAIQEGDILG 370

Query: 366 VRSSGAYGFTMSSNYNTRPRVAEVMV--DGNKTYLVRQREELSSLWAL 411
           V  +GAYG+ MSS YN R R AEV++  DG +  L+R+REEL+ L AL
Sbjct: 371 VLDAGAYGYAMSSTYNQRLRPAEVLIGLDG-EPRLIRRREELADLMAL 417