Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., diaminopimelate decarboxylase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  451 bits (1161), Expect = e-131
 Identities = 233/413 (56%), Positives = 302/413 (73%), Gaps = 3/413 (0%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           M +F Y+E GQL+AE VP+ +LA++YGTPLYVYS ATL RH+ AFD +     HL CY+V
Sbjct: 1   MHHFQYRE-GQLYAEGVPVHELASRYGTPLYVYSAATLRRHFQAFDSAFTGVGHLTCYSV 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSN+ +L  LA +G+G DIVS GEL R LAAG    ++V+SGVGK + E++ AL+  I
Sbjct: 60  KANSNVHLLRLLADMGAGMDIVSGGELHRALAAGVPGQRIVYSGVGKQDDEIRAALEADI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
             FNVES  EL+R+N VAG++G  A I +RINPDVD KTHPYISTG+R+NKFG+  ++A 
Sbjct: 120 LLFNVESVQELERINAVAGQMGRTARIGVRINPDVDPKTHPYISTGMRNNKFGLDMEQAL 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
             Y LA  LPN+   GIDCHIGSQLT LAPF++A DR+L   + L+  G+ I HLD+GGG
Sbjct: 180 AAYLLARDLPNVQPVGIDCHIGSQLTTLAPFLEALDRVLDFHERLRDLGLAITHLDLGGG 239

Query: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300
           LG+ Y +E PP P E+ +A+ +RL R R L LI EPGR IA NAG+LV +V + K T  K
Sbjct: 240 LGITYGEETPPHPREFGEAVSERL-RGRGLSLILEPGRVIAGNAGILVGRVIYTKSTPSK 298

Query: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQ 359
           NF I DAAMNDL+RP+LYQ++  I  ++P   +  T D+VGP+CE+ DFL +DR L  +Q
Sbjct: 299 NFIIADAAMNDLVRPSLYQSYHRIAEVQPAGRDEITADVVGPICESGDFLARDRILPDMQ 358

Query: 360 EGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALE 412
           +G+LLAV S+GAYGF+MSSNYN+RPR AEV+VDG     +R+RE L+ L A E
Sbjct: 359 QGELLAVFSAGAYGFSMSSNYNSRPRAAEVLVDGATARCIRKRETLADLVAPE 411