Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis JJ

 Score =  290 bits (741), Expect = 8e-83
 Identities = 162/415 (39%), Positives = 252/415 (60%), Gaps = 15/415 (3%)

Query: 8   EDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPH------LICYAVK 61
           + G L  +    + LA+ YGTPLYV S     +++  + +S  +Y        +I +A K
Sbjct: 12  DGGNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYK 71

Query: 62  ANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIK 121
           AN+NL V   L++LG G DIVS GEL     +     K+VF+G  K + E+K  ++ +I+
Sbjct: 72  ANTNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIR 131

Query: 122 CFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDR--A 179
            FNV+S  EL  +N+ A E+G  A ++ R+NP+VDAKTHP ISTG++ NKFG+  +   A
Sbjct: 132 AFNVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIA 191

Query: 180 AQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGG 239
            +  ++A  + N+ + GI CHIGSQLT ++PF++   +++  +  LK EGI IR +++GG
Sbjct: 192 LETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGG 251

Query: 240 GLGVVY-RDELPPQPSEYAKALLDRLERHRDL----ELIFEPGRAIAANAGVLVTKVEFL 294
           GLG+ Y ++   P   + +KA+LD +  +        LI EPGR++ A AGVL+  VE +
Sbjct: 252 GLGIPYDKNTKIPVQKDLSKAILDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHV 311

Query: 295 KHTEHKNFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDR 354
           K T    + +IDA MND++RPA+Y+A+ +I P   R  E +   + G +CE+SD  GKDR
Sbjct: 312 KETPVAKWVMIDAGMNDMMRPAIYEAYHEITPCTIR-AEKEVVSVAGGLCESSDVFGKDR 370

Query: 355 DLVLQE-GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSL 408
           +L   E  D +A+   GAYG +M++NYN+R + A ++    +  L+R RE L+ L
Sbjct: 371 ELPKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTSEKEVSLIRARETLADL 425