Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., diaminopimelate decarboxylase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  423 bits (1088), Expect = e-123
 Identities = 218/413 (52%), Positives = 289/413 (69%), Gaps = 3/413 (0%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           M  F Y+E G L+AE V + DLA+ YGTPLYVYS  TLERH+ AFD + G   HL C++V
Sbjct: 1   MHLFQYRE-GSLFAEDVSIIDLASTYGTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSV 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KA SN+ +L  L  LG+G DIVS GEL R L AG    ++V+SGVGK   E++ AL+  I
Sbjct: 60  KACSNIHILKLLGSLGAGVDIVSGGELHRALLAGIPGRRIVYSGVGKRPDEIRSALEADI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
             FNVES  EL+ + +VA  +G  A +SLRINPDVD  THPYISTGL+ NKFGI   +A 
Sbjct: 120 LMFNVESLQELRTIEEVAASMGTTARVSLRINPDVDPHTHPYISTGLQKNKFGIEMTQAL 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
           + Y LA  LP++D  GIDCHIGSQLT+L+PF++A D++L   + L   G+ I +LD+GGG
Sbjct: 180 EGYMLARDLPHIDPIGIDCHIGSQLTSLSPFLEALDKVLEFREHLSILGLDISYLDLGGG 239

Query: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300
           LG+ Y +E PP P ++ +A+L+R  +  +L L+ EPGR IA NAG+LVT+V + K T  K
Sbjct: 240 LGITYGEETPPHPRDFGRAVLER-TKGLNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSK 298

Query: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDL-VLQ 359
            F I+DAAMNDL+RP+LY ++  I  + P     QT D+VGP+CE+ DFL +DR L  ++
Sbjct: 299 QFVIVDAAMNDLVRPSLYASYHRIAEVLPHGRTEQTVDVVGPICESGDFLARDRVLPAVE 358

Query: 360 EGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALE 412
           +G+LLAV S+GAYGF+MSS YN+RPR AEV+V G+    +R+RE    L ALE
Sbjct: 359 QGELLAVFSAGAYGFSMSSQYNSRPRAAEVLVRGDTAKSIRRRETYDDLTALE 411