Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., diaminopimelate decarboxylase from Caulobacter crescentus NA1000

 Score =  365 bits (936), Expect = e-105
 Identities = 209/420 (49%), Positives = 276/420 (65%), Gaps = 9/420 (2%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSV---GDYPHLIC 57
           M++F Y   G L  E VPLA +A + GTP+YVYSRATLERH+  F  ++   G    LI 
Sbjct: 1   MNHFEYGPQG-LACEGVPLAKIAAEVGTPVYVYSRATLERHFVVFRDALAMSGVVDPLIA 59

Query: 58  YAVKANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQ 117
           YAVKANSN+ VL  L  LG+G D VS GE+ R LAAG    ++VFSGVGK   E+  ALQ
Sbjct: 60  YAVKANSNVAVLKVLGDLGAGADTVSEGEVRRALAAGIPGERIVFSGVGKARREIAFALQ 119

Query: 118 LKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFD 177
             +   NVESEPEL  + +VA ELGV+A ++ R+NPDV A  H  I+TG  +NKFG++F 
Sbjct: 120 AGVAEINVESEPELNLIAEVAAELGVRAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFA 179

Query: 178 RAAQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDV 237
            AA++Y  A +  NL   G+ CHIGSQ+T LAP   A  ++  L++ L AEG+ +  LD+
Sbjct: 180 EAARLYANASNNANLQPVGVACHIGSQITDLAPMRAAFTKMRGLVEQLLAEGLSVERLDL 239

Query: 238 GGGLGVVYRDEL-PPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFL-K 295
           GGGLGV Y +   PP P+E+A A++  + +   + L FEPGR IAANAGVLV++V  + +
Sbjct: 240 GGGLGVPYFNHPEPPSPAEFA-AMVGEVTQGLPVTLAFEPGRVIAANAGVLVSEVIHVHE 298

Query: 296 HTEHKNFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRD 355
             E + F +IDAAMNDL+RPA+Y A+ DI P+  R GE   YD+VGPVCET D   +DR 
Sbjct: 299 RPEGRKFLVIDAAMNDLVRPAMYDAFHDIRPVIQRTGET-VYDVVGPVCETGDTFTRDRA 357

Query: 356 L-VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESV 414
           L     GDL+A  S+GAYG  M+S YNTRP V EV+VDG++  ++RQR     + A + V
Sbjct: 358 LPPFAAGDLVAFMSAGAYGAAMASEYNTRPLVPEVLVDGDRYAVIRQRPTYDEMLARDLV 417