Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., diaminopimelate decarboxylase (EC 4.1.1.20) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  259 bits (663), Expect = 7e-74
 Identities = 153/362 (42%), Positives = 214/362 (59%), Gaps = 8/362 (2%)

Query: 28  TPLYVYSRATLERHWHAFDKSVGDYP-HLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86
           TP Y Y    L     A ++ V  YP + + YAVKAN+N  VL  +   G G D VS GE
Sbjct: 15  TPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCVSGGE 74

Query: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 146
           +   + AG   +K+VF+GVGK + E+   L+  I CFNVES PEL+ +N++A      A 
Sbjct: 75  IRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKIAN 134

Query: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206
           ++ RINPDV A TH  I+TGL +NKFGI+     +V  +A  + N+   G+  HIGSQ+ 
Sbjct: 135 VAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIGSQIL 194

Query: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVY----RDELPPQPSEYAKALLD 262
            +  FI   +R+  L D L+A  I + H++VGGGLG+ Y    R  +P   S +A     
Sbjct: 195 DMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYFA-TYAG 253

Query: 263 RLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQ 322
           +L+      L FE GRA+    G L++KV ++K    K FAI+DA M DLIRPALYQA+ 
Sbjct: 254 QLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALYQAYH 313

Query: 323 DIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDL-VLQEGDLLAVRSSGAYGFTMSSNYN 381
            +  +   +   + YD+VGP+CE+SD  GK  DL  ++ GDL+A+RS+GAYG  M+S YN
Sbjct: 314 KMENITSEE-PVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 382 TR 383
            R
Sbjct: 373 CR 374