Pairwise Alignments

Query, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

 Score =  581 bits (1497), Expect = e-170
 Identities = 290/416 (69%), Positives = 333/416 (80%), Gaps = 2/416 (0%)

Query: 1   MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 60
           MD+F YQ D  L+AE   + DLA QYGTPLY+YSRATLERHWHAF+ +V D+PHL+CYAV
Sbjct: 1   MDHFLYQ-DNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAV 59

Query: 61  KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 120
           KANSNL VLN LARLGSGFDIVS GEL RV+ AGGDP+KVVFSGVGKT AEM++AL L I
Sbjct: 60  KANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGI 119

Query: 121 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 180
            CFNVES  EL++LN VAG LG  AP+SLR+NPDVDA THPYISTGL++NKFGI  D A 
Sbjct: 120 YCFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAE 179

Query: 181 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 240
            V+  AH+LP+L V G+DCHIGSQLT + PF+DA DR+LALID L  +GI I H DVGGG
Sbjct: 180 VVFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGG 239

Query: 241 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 300
           LGV Y DE PP P  YA ALL RL   R L+LIFEPGRAIAANAG+ VT+V +LK    K
Sbjct: 240 LGVTYDDETPPHPDVYAAALLARL-GDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDK 298

Query: 301 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE 360
            FAI+D AMNDLIRPALY AWQ+IIP+ PR  +AQ +D+VGPVCET DFLGKDR L +  
Sbjct: 299 RFAIVDGAMNDLIRPALYSAWQNIIPVNPRDEQAQVFDIVGPVCETGDFLGKDRALAIAA 358

Query: 361 GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLP 416
           GDLL VRSSGAYGF M+SNYNTRPR AEVMVDG+K YLVR+RE+L+ LW  E +LP
Sbjct: 359 GDLLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQLLP 414