Pairwise Alignments

Query, 462 a.a., oxygen-independent coproporphyrinogen III oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (312), Expect = 4e-33
 Identities = 104/392 (26%), Positives = 178/392 (45%), Gaps = 23/392 (5%)

Query: 57  PLSLYIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRASLLIGRNVTQLHFG 116
           PLSLYIHIP+C + C YC  N           EY+D L ++++  A+ + GR++  +  G
Sbjct: 6   PLSLYIHIPWCVQKCPYCDFNSHGQHGELPQQEYVDDLLNDLKNDAAYVQGRSLHSIFIG 65

Query: 117 GGTPTFLTNAQISRLMTLLHSEFHFADEAEISIEIDPREIQLEVLDHLRQEGFNRVSIGV 176
           GGTP+    +QI RL+  + ++  FA + EI++E +P  ++ +        G  R+SIGV
Sbjct: 66  GGTPSLFDASQIERLLDGVRAQIPFAPDIEITMEANPGTLEHDDFSAYCAAGVTRLSIGV 125

Query: 177 QDFNKEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQTAVTFAQTLQQVLT 236
           Q F+ +   L+ R  D+        +A Q G++S NLDL++GLP Q+     + + +   
Sbjct: 126 QSFSSDKLNLLGRIHDKHEAEVAATKAAQAGYQSFNLDLMHGLPNQSFEEAMRDIDKAAA 185

Query: 237 MQPGRLSVFNYAHMPQ-LFAAQRKIKEADLPAAEEKLAILQQTITTLTGAGYQFIGMDHF 295
           + P  LS +     P  LF +    K   LP  E    I +Q    L   GY+   +  +
Sbjct: 186 LNPPHLSWYQLTIEPNTLFHS----KPPQLPDDEALWQIYEQGQQRLAALGYEQYEISAY 241

Query: 296 ALPDDELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAYAQNQKELKKYYAQV 355
           A P          G   R+   Y   G  D +G G  A   +    A++Q+  +    ++
Sbjct: 242 AKP----------GYQCRHNLNYWQFG--DYLGIGCGAHGKI--TMAEDQRIYRT--VKI 285

Query: 356 NEMRHALWKGVTL-DKDDLLRRE-VIKQLICNFKLDKTAIEREFNLRFNHYFRQDLALLQ 413
              +  L  G  L DK ++L  +  ++ L+   +L     +REF  R           + 
Sbjct: 286 KHPKGYLGAGDYLFDKSEVLAEDRALEYLMNRLRLMSPIPKREFESRTGLSAEVLNEGMA 345

Query: 414 TFIDDGLVTVDERMIEVTLRGRLLIRNICMCF 445
                GLV + +   ++T +G++ +  +   F
Sbjct: 346 RGAAKGLVIIQDEHWQLTAKGQMFVNELLGLF 377