Pairwise Alignments

Query, 182 a.a., GTPase-activating protein from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 85.1 bits (209), Expect = 6e-22
 Identities = 67/183 (36%), Positives = 101/183 (55%), Gaps = 16/183 (8%)

Query: 5   KKSRKPGTNSNDQLVVVRTRSESELESRLRKKLKKRKGLKSGSRHSEGSESQVRQA-AQK 63
           KKSRK   N N      RT+ E     R+    K++ G K+GSRH+E    Q +   AQ 
Sbjct: 4   KKSRK--INENAPKRPPRTKKED----RVVTGKKQKSGNKAGSRHNEKQIQQKQSGTAQA 57

Query: 64  RDPRLGSKKPIPLIVAEPKKLNKQER--KLAAEQELAMLEKDAQLNVLLDRLDNGEKLGI 121
           +DPR GSKKP+ L +     + KQ +  K++ EQ+L  LE+D +LN LLD L+ G  L  
Sbjct: 58  KDPRHGSKKPVALELPTKAPVAKQPKAPKMSDEQKLLKLEEDPRLNKLLDMLEEGRDLND 117

Query: 122 GLQKYVDEKLDRIEVLMEQLGLLDDEPEPAPAPQSKPTKKRKTEDDLLSEFEQ-LDVDK- 179
             Q +++++L  IE LM++LG+ +++       +        ++DDLL +FE   D+ K 
Sbjct: 118 ADQAWLEKQLTEIERLMDRLGITEEDD-----LEHVMKTTVGSDDDLLDKFESGADLLKD 172

Query: 180 YQD 182
           YQD
Sbjct: 173 YQD 175