Pairwise Alignments

Query, 222 a.a., class I SAM-dependent methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  159 bits (403), Expect = 3e-44
 Identities = 83/215 (38%), Positives = 116/215 (53%), Gaps = 8/215 (3%)

Query: 11  MHLCPLCHSENSQAYFADKQRDYFQCQQCELVYVNPEQRLSAEREKGFYDLHQNIPSDEG 70
           M  CPLCHS  +     DK+R ++ CQ C L + +    L    EK  Y     I S + 
Sbjct: 1   MRRCPLCHSTQTHLLLQDKKRCFYICQTCWLTFADANSHLPPAAEKQRYG-RSRIASKQ- 58

Query: 71  YRRFLSRVCSPMLERVPPQSQG----LDFGCGPGPTLSLMLEEAGHSMALYDIFYHPDTQ 126
             R LS+   P+L ++  Q  G    L+FG     T    +E AGH+   YD F+ PD +
Sbjct: 59  --RHLSQFILPLLTQIQQQQNGSLTGLNFGRVLDQTSLETIESAGHTFKQYDPFFAPDHE 116

Query: 127 VLNRQYDFMTATEVIEHLHDPHRVWQQWLNLVKPGGWIGLMTKMVKDLDAFAGWHYKNDL 186
            L ++YDF+    V EH   P + W     L+KPGGW+ + T ++ DL+ FA WHYKN+L
Sbjct: 117 TLKQEYDFICCYRVFEHFQYPIKEWSLLTRLLKPGGWLAISTPLLIDLEGFAKWHYKNNL 176

Query: 187 THVIFFSRATFQYLAERDQLELEFIGNDVILLRKT 221
           THV F+ R TF+YLA     EL F   D++L++KT
Sbjct: 177 THVSFYQRQTFEYLASNSDFELLFAAKDLVLMQKT 211