Pairwise Alignments

Query, 205 a.a., cytochrome c4 from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., cytochrome C553 from Herbaspirillum seropedicae SmR1

 Score = 98.6 bits (244), Expect = 9e-26
 Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 24/214 (11%)

Query: 4   LALILSVLASCSVWAQGSIEAGKA----------KSLTCAACHGADGNSPLT-IYPKLAG 52
           + L + V  +CS+ A  + EA  A          +   C ACHG  G +     YP++AG
Sbjct: 34  IVLAIGVGMACSLAAAAAPEAAPAAPAAIAGMAERMAACTACHGKQGRATADGYYPRIAG 93

Query: 53  QHEKYLEKQLKELKLGASSGGKQGRYDPVMSAMAMPLSDEDIADLAAYYASM-----PIS 107
           + E YL  QL+  + G      Q RY P+M+ +   LSD+ +  +A ++A       P +
Sbjct: 94  KPEAYLLNQLQSFRDG------QRRY-PMMNYLLANLSDDYLQQIARFFADQHPPYPPPA 146

Query: 108 GNTTPEDVVAQGKVLYTAGDASRGLTACIACHGPRGNGTELSGFPKISGQHADYIKAQLE 167
            N     V+ +G+ L T GD  R L AC ACH P   G +  G P + G   DYI AQL 
Sbjct: 147 SNEASATVLERGRRLVTEGDPQRRLPACAACHAPSLGGVQ-PGIPGLLGLPRDYINAQLG 205

Query: 168 KFRSGTRANDMNEMMRDVAHKLTDADIDILSKYV 201
            +R+G R     + M  VA  L+  +I+  S ++
Sbjct: 206 AWRNGDRTAKTPDCMAAVARALSPEEINAASSWL 239



 Score = 46.2 bits (108), Expect = 6e-10
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 125 AGDASRGLTACIACHGPRGNGTELSGFPKISGQHADYIKAQLEKFRSGTRANDMNEMMRD 184
           AG A R + AC ACHG +G  T    +P+I+G+   Y+  QL+ FR G R      MM  
Sbjct: 63  AGMAER-MAACTACHGKQGRATADGYYPRIAGKPEAYLLNQLQSFRDGQR---RYPMMNY 118

Query: 185 VAHKLTDADIDILSKYVGGLH 205
           +   L+D  +  ++++    H
Sbjct: 119 LLANLSDDYLQQIARFFADQH 139