Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 932 a.a., DNA polymerase I (EC 2.7.7.7) from Acidovorax sp. GW101-3H11

 Score =  899 bits (2324), Expect = 0.0
 Identities = 480/936 (51%), Positives = 631/936 (67%), Gaps = 20/936 (2%)

Query: 9   LILIDGSSYLYRAFHAYPGTMS----NGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDA 64
           L+L+DGSSYLYRAFHA P   +     G   T AI G++NM++++ ++  +D    +FDA
Sbjct: 7   LVLVDGSSYLYRAFHAMPDLRAVPGDPGSPATGAIRGMINMMQALRKEVPADYAVCVFDA 66

Query: 65  KGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQ 124
            G TFRD +Y +YKA R PMPD+LR Q+EP+H+V+  +G  ++A+ GVEADDVI TLA  
Sbjct: 67  SGPTFRDALYTEYKATRSPMPDDLRSQIEPIHEVVDLLGWKVVAVPGVEADDVIATLANV 126

Query: 125 ASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMG 184
           A+  G+ V++S+GDKD++QLV+++IT+I+TM+    D  GV  +FG+PP L++DY AL+G
Sbjct: 127 AAAQGIEVIVSSGDKDLSQLVNEHITIIDTMSGKRRDVAGVTAEFGVPPALMVDYQALVG 186

Query: 185 DKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAK 244
           D VDN+PGV  VG KTA   L+  G L+ L AN D I  +     +          G   
Sbjct: 187 DTVDNVPGVTKVGPKTAAKWLEEYGSLDNLIANADAIKGVAGNNLREAIAS-----GQLA 241

Query: 245 LSYQLATIKCDVELEE------SPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGI 298
           LS QL T+K D  L +      +   +    PD   L+  Y K  FK  L   + GG   
Sbjct: 242 LSRQLVTMKTDCALADYIPGLPAFDDITLDAPDNAGLLPFYEKYGFKG-LASAIKGGAAP 300

Query: 299 VTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFA 358
                       +    A H+A+     A H     Y TILN  DF  WLE+L++A L A
Sbjct: 301 AATAPTVAMPGQSGDLFADHSASTVAEEAQH-RTVVYDTILNWADFDQWLERLQKAPLAA 359

Query: 359 FDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDES 418
            DTETD+LD M A +VG+SF+V  GEAAY+P+ H+  DAP+QL  D V+A+LKP LED  
Sbjct: 360 IDTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPEQLSIDEVLARLKPWLEDPK 419

Query: 419 KAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISF 478
             K+GQ++KYD  V A +G+E++G  HDTMLQSYV   V   H++ SLA R      I++
Sbjct: 420 HHKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLE-VHKPHNLTSLAERHTGRKGITY 478

Query: 479 EQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPL 538
           E + GKG +Q+ F Q+ +++AA Y+ ED+D TL +H  + PL++ D KL  +Y E+EM  
Sbjct: 479 EDLCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIY-ELEMQS 537

Query: 539 VPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQ 598
              L RIER GV+ID   L+AQS E+  R+ QLE  AYE+AGQPFNLSSPKQL  I F++
Sbjct: 538 SEALYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDK 597

Query: 599 MKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTG 658
           + +PV++KT +G  ST+EEVL++LA DYPLP  L+E+RGL KLK TYTDKL ++  P TG
Sbjct: 598 LGMPVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRGLVKLKGTYTDKLAQLALPRTG 657

Query: 659 RVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRI 718
           RVHT Y QAV  TGRLSS DPNLQNIP+R  EGRR+R+AFVAP G  I + DYSQIELRI
Sbjct: 658 RVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGRVIASADYSQIELRI 717

Query: 719 MAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGL 778
           MAHLSGD +LL AF  G D+H ATAAE+ GV +DQV+SEQRR AK +NFGLIYGMS+FGL
Sbjct: 718 MAHLSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGL 777

Query: 779 AKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNA 838
           AK LGI    A  Y+DKYF+RYPGV QYM+DT++ A  +GYVET+FGRRL+LPEI S N 
Sbjct: 778 AKNLGIETKAAAAYIDKYFQRYPGVKQYMDDTKAAAKSMGYVETVFGRRLYLPEINSPNG 837

Query: 839 MRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESS 898
            RR  AERAAINAPMQGTAAD+IK AM+ V + ++      +K++MQVHDELVFE+ E  
Sbjct: 838 PRRAGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKPD-IKMIMQVHDELVFELPEGE 896

Query: 899 LSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
           +  +++ + +LM   A L VPL+AE G G NW++AH
Sbjct: 897 VDWLKTHIPRLMAEVAALKVPLLAEVGVGANWDKAH 932