Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 927 a.a., DNA polymerase I (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  921 bits (2381), Expect = 0.0
 Identities = 495/935 (52%), Positives = 639/935 (68%), Gaps = 20/935 (2%)

Query: 9   LILIDGSSYLYRAFHAYPG-TMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGK 67
           L+LIDGSSYLYRAFHA P  T + GE PT A++GVVNM+R+ +++  +  +A + DA GK
Sbjct: 4   LVLIDGSSYLYRAFHALPPLTNAQGE-PTGALFGVVNMLRATLKERPA-YVAFVVDAPGK 61

Query: 68  TFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQ 127
           TFRD++Y  YKA+RP MPD+LR QV+P+  ++ A+G+ +L I+GVEADDVIGTLA Q + 
Sbjct: 62  TFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGAS 121

Query: 128 AGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDR-EGVIEKFGIPPELIIDYLALMGDK 186
            G+ V ISTGDKD AQLV   + L+NTM+   +D  E VI KFG+ P  I+D LALMGD 
Sbjct: 122 DGLAVTISTGDKDFAQLVRPGVELVNTMSGSRMDSDEAVIAKFGVRPNQIVDLLALMGDT 181

Query: 187 VDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLS 246
           VDN+PGV   G KTA   L     L+ + AN DKI        +    +L  NR      
Sbjct: 182 VDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGENLRAALPRLPLNR------ 235

Query: 247 YQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLD-----GGTGIVTA 301
            +L TIK DV L   P+ L  + P+ +AL  LY +  F   L EL       GG     A
Sbjct: 236 -ELVTIKTDVVLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAEAGGLTAPMA 294

Query: 302 DEQTKTSSV--TVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAF 359
             +T+      T   +A  AA +   PA      QY+TIL +     W+ +L+ A  FAF
Sbjct: 295 VARTEPGRARGTGFVSAPAAAPVELDPALSAP-GQYETILTQAQLDSWIARLRAAGQFAF 353

Query: 360 DTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESK 419
           DTETD+LD + ANL+G+S A   G+AAYLP  HD+  AP QL+R   +AQL PLL D + 
Sbjct: 354 DTETDSLDALQANLIGLSVAAEPGQAAYLPFGHDFPGAPAQLDRTQALAQLAPLLTDPAV 413

Query: 420 AKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFE 479
            K+GQ+ KYD  VM R+G+ L G   DT+L+S+V NS   +HDMDSLA R+L +  + +E
Sbjct: 414 RKLGQHGKYDLHVMRRHGIALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYE 473

Query: 480 QVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLV 539
            + GKG  Q+ F Q++LE+A +YAAEDAD+TLRLHQ +   +  +  LE VYR+IEMPLV
Sbjct: 474 DICGKGAKQIKFAQVSLEDATRYAAEDADITLRLHQVLGKRLAAEPALESVYRDIEMPLV 533

Query: 540 PVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQM 599
            VL RIE  GV +D   L  QS +++ R+   +Q A ELAG+ FNL SPKQLQ +LF+++
Sbjct: 534 GVLERIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDEL 593

Query: 600 KLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGR 659
           KLP + KTP G PSTNEE L+ +A  + LP+V+++YR LAKL+STYTDKLP+MI+P +GR
Sbjct: 594 KLPAVVKTPKGQPSTNEEALEAIADQHELPRVILDYRSLAKLRSTYTDKLPEMIHPQSGR 653

Query: 660 VHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIM 719
           VHTSYHQA  ATGRLSS+DPNLQNIP+R E+GRRIR+AFVAP G K++A DYSQIELRIM
Sbjct: 654 VHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIM 713

Query: 720 AHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLA 779
           AHLSGD  L+ AF  G D+H ATAAE+ G  ID VS ++RR AKA+NFGL+YGMSAFGLA
Sbjct: 714 AHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLA 773

Query: 780 KQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAM 839
           +QLGI RGEAQ+Y+  YF RYPGV  +ME TR +A   GYVET+FGRRL+L  I + +  
Sbjct: 774 RQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQG 833

Query: 840 RRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSL 899
           +R  AERAAINAPMQGTAADIIK+AM+ VD WI      R  +++QVHDELVFE     +
Sbjct: 834 QRAGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQ-RALMILQVHDELVFEADADFV 892

Query: 900 SEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
             + ++V   M +AA L VPLV ++G GDNW++AH
Sbjct: 893 DTLLAEVTARMSAAASLRVPLVVDSGVGDNWDEAH 927