Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 921 a.a., DNA polymerase I from Pseudomonas syringae pv. syringae B728a

 Score = 1041 bits (2693), Expect = 0.0
 Identities = 533/938 (56%), Positives = 690/938 (73%), Gaps = 32/938 (3%)

Query: 8   PLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAVIFDAKGK 67
           PL+L+DGSSYLYRAFHA P   ++  +PT A+ GV+NM++S+ RQ+    +AV+FDAKG 
Sbjct: 5   PLVLVDGSSYLYRAFHALPPLATSKGLPTGAVKGVLNMLKSLRRQYPDSPLAVVFDAKGG 64

Query: 68  TFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGTLARQASQ 127
           TFRD +Y+ YKA+RP MPD+LR QV+ LH  ++ MG P L +EGVEADDVIGTLAR ++ 
Sbjct: 65  TFRDALYNDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLARSSAA 124

Query: 128 AGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKV 187
           A  PV+ISTGDKDMAQLVD +ITL+NTMT  VLD  GV EKFG+ PE IIDYLALMGDKV
Sbjct: 125 ADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALMGDKV 184

Query: 188 DNIPGVPGVGEKTATALLQGIGG-LEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLS 246
           DNIPGVPGVGEKTA  LL GIGG ++ LY NLDK+A+L  RG+KT+A KLEE+R  A LS
Sbjct: 185 DNIPGVPGVGEKTAVGLLVGIGGGIKELYENLDKVASLPIRGAKTLAAKLEEHREMAFLS 244

Query: 247 YQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVTADEQTK 306
           Y+LATIK DV L+     L    PDRD LM LY +L FKSW+ +L          D +  
Sbjct: 245 YELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDL--------QRDAKRA 296

Query: 307 TSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFDTETDNL 366
              +T+           E P A    + Y+ IL +  F  WL+KL+ A LFAF T+++  
Sbjct: 297 GQELTI-----------EEPTAEAREAAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGT 345

Query: 367 DYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKAKVGQNL 426
           D   A LVG+SFA+   EAAY+P+ H Y+  PQQL+RD V+  LKPLLED  K KVGQ+ 
Sbjct: 346 DAQRAQLVGLSFAIQTHEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKIKVGQHA 405

Query: 427 KYDASVMAR--------YGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISF 478
           K+  +++A          G++L+G+R DT+L+SYV +S   +HD DSL  ++L H+ I+F
Sbjct: 406 KFAINLLANCAIDGDQAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINF 465

Query: 479 EQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPL 538
           +++AGKG  QL+F+QIALE+A  YAAE+AD+TLRLH+     +     L+ V  +IEMPL
Sbjct: 466 QEIAGKGAKQLSFDQIALEQAGNYAAEEADLTLRLHEVFDARLAAIPTLQPVLNDIEMPL 525

Query: 539 VPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQ 598
           VPVL+RIER G ++D  LL  QS E+  ++  LE+ A+ +AG+ FNL SPKQL  IL+E+
Sbjct: 526 VPVLARIERQGALVDANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEK 585

Query: 599 MKLPVLQKTPSGTPSTNEEVLQELA-LDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPST 657
           + +P+L KT +G  ST E VL ELA  D+PLPKVL++YR ++KLKSTYTD+LP+ INP T
Sbjct: 586 LGMPILSKTATGQASTAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRT 645

Query: 658 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELR 717
           GR+HTSYHQAV  TGRLSS+DPNLQNIP+R  EGRRIRQAFVAP G+K++A DYSQIELR
Sbjct: 646 GRIHTSYHQAVAVTGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELR 705

Query: 718 IMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFG 777
           IMAHL+ D+ LL AFR+  D+H ATAAE+ GV ++ V+++ RR AKA+NFGLIYGMSAFG
Sbjct: 706 IMAHLAQDEGLLHAFRNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFG 765

Query: 778 LAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRN 837
           LAKQ+G+ R ++Q Y+D+YF RYPGV+ YME TR++AA+ G+VETIFGRRL+LP+I ++N
Sbjct: 766 LAKQIGVDRKQSQAYVDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLYLPDINAKN 825

Query: 838 AMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREG-DGRVKLLMQVHDELVFEVKE 896
              RK AER AINAPMQGTAADIIKKAM+ V+ W++  G D RV  ++QVHDELV EV+E
Sbjct: 826 QSLRKGAERMAINAPMQGTAADIIKKAMVAVNGWLDESGLDARV--ILQVHDELVLEVRE 883

Query: 897 SSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934
             + +I  +++  M  AAELAVPL+ E G G+NW++AH
Sbjct: 884 DLVDQISEQIRPHMSGAAELAVPLLVEVGVGNNWDEAH 921