Pairwise Alignments

Query, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

Subject, 1004 a.a., DNA polymerase I from Sinorhizobium meliloti 1021

 Score =  692 bits (1786), Expect = 0.0
 Identities = 412/1007 (40%), Positives = 586/1007 (58%), Gaps = 90/1007 (8%)

Query: 9    LILIDGSSYLYRAFHAYPGTMSNGE-IPTNAIYGVVNMIRSMMRQ-------FASDRMAV 60
            L L+DGS +++RAFHA P      + +P NA+ G  NM+  ++              +AV
Sbjct: 7    LFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVTPTHLAV 66

Query: 61   IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT 120
            IFD   KTFR+ +YDQYKA+R   P++L  Q   +    RA  LP +  EG EADD+I T
Sbjct: 67   IFDYSSKTFRNGLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEADDLIAT 126

Query: 121  LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL 180
             AR A +AG  V I + DKD+ QLV   +++ ++M +  +    VIEK+G+PPE +ID  
Sbjct: 127  YARLAEEAGADVTIVSSDKDLMQLVTPKVSMYDSMKDKQITVPDVIEKWGVPPEKMIDLQ 186

Query: 181  ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR 240
            A+ GD  DN+PG+PG+G KTA  LL+  G L+ L A   +I        +   + +  N 
Sbjct: 187  AMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIK------QQKRRESIIANA 240

Query: 241  GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTEL--------- 291
              A+LS +L T+K D  L+  P+     + D   L++    + F +    +         
Sbjct: 241  DLARLSRELVTLKKDTPLDVPPEDFRLDSQDGPKLIAFLKAMEFTTLTRRVAAATDTDAE 300

Query: 292  -------------------LD-GGTGIVTADEQTKTSSVTVSTAATHAAA---------- 321
                               LD G  G      Q+ +++     AA  A +          
Sbjct: 301  AIEPAHVPVEWGAQAHGPDLDVGEAGGPPPSPQSSSATPPRGNAARAAVSFLSSGQDADT 360

Query: 322  -------IPESPAAH-----IDRSQYQTILNEQDFQLWLEKLKQAELFAFDTETDNLDYM 369
                   + E+ AA+      D S Y+TI +    + W+   ++A L  FDT+  + D M
Sbjct: 361  TGATPTGLAEARAAYFGKAPFDHSGYRTIRDIDTLERWIADAREAGLVGFDTQATSPDAM 420

Query: 370  VANLVGMSFAVAEG---------EAAYLPVAH-----DYL---DAPQQLERDWVIAQLKP 412
             A+LVG S AVA+           AAY+P+AH     D L       Q+     +++LK 
Sbjct: 421  RADLVGFSLAVADYANDPSGSRIRAAYVPLAHKSGVSDLLGGGPVDSQVPGRETLSRLKE 480

Query: 413  LLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQ 472
            LLED S  KVGQNLKY   VM R+G+ +R    DTML SYV ++  G H MDSLA R+L 
Sbjct: 481  LLEDPSVLKVGQNLKYGYLVMKRHGIAMRSF-DDTMLMSYVLDAGNGAHGMDSLAERWLG 539

Query: 473  HSCISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYR 532
            H+ I+++ V G G++ LTF+ + +++A  YAAEDAD+ LRL   + P +     L +VY 
Sbjct: 540  HTPIAYKDVTGTGRSSLTFDFVDIDKATAYAAEDADIALRLWHVLKPRLAAKG-LTRVYE 598

Query: 533  EIEMPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQ 592
             +E PL+ VL+ +E  G+ +D  +LS  S E+A     LE   Y LAG+ F + SPKQL 
Sbjct: 599  RLERPLISVLAGMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLG 658

Query: 593  TILFEQMKLPVLQKTPSGTPSTNEEVLQEL-ALDYPLPKVLIEYRGLAKLKSTYTDKLPK 651
             ILF +M LP   KT +G  ST+ +VL++L A  + LP+ ++++R L KLKSTYTD LP 
Sbjct: 659  DILFGKMGLPGGSKTKTGQWSTSAQVLEDLAAAGHDLPRKIVDWRQLTKLKSTYTDALPG 718

Query: 652  MINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDY 711
             ++P T RVHT +  A T TGRLSS+DPNLQNIP+R  EGR+IR AFVA  G K+++ DY
Sbjct: 719  FVHPETKRVHTCFAMAATTTGRLSSSDPNLQNIPIRTGEGRKIRTAFVATPGHKLVSADY 778

Query: 712  SQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIY 771
            SQIELR++AH++    L  AF DG DIHA TA+E+ GVP+D + SE RRRAKA+NFG+IY
Sbjct: 779  SQIELRVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVDGMPSEIRRRAKAINFGIIY 838

Query: 772  GMSAFGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLP 831
            G+SAFGLA QL I R EA +Y+ +YFER+PG+  YME+T++ A + GYVETIFGRR H P
Sbjct: 839  GISAFGLANQLSIERSEAGDYIKRYFERFPGIRDYMENTKAFARENGYVETIFGRRAHYP 898

Query: 832  EITSRNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELV 891
            +I S N   R   ERA+INAP+QG+AADII++AM+ ++  +E       ++L+QVHDEL+
Sbjct: 899  DIRSSNPSMRAFNERASINAPIQGSAADIIRRAMVKMEPALE-AAKLSARMLLQVHDELI 957

Query: 892  FEVKESSLSEIESKVQQLMESAA----ELAVPLVAEAGHGDNWEQAH 934
            FEV++  +      +  +ME+AA    ++ VPL  +A    NW++AH
Sbjct: 958  FEVEDGEIERTIPVIISVMENAAMPALDMRVPLKVDARAAHNWDEAH 1004